Top 10 genes with highest correlation to Rv2636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3354/- | (cc=0.6983) | info on Rv3354/- |
| Rv1180/pks3 | (cc=0.6564) | info on Rv1180/pks3 |
| Rv3295/- | (cc=0.6491) | info on Rv3295/- |
| Rv1181/pks4 | (cc=0.6488) | info on Rv1181/pks4 |
| Rv2032/acg | (cc=0.6246) | info on Rv2032/acg |
| Rv1999c/- | (cc=0.6215) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.6201) | info on Rv2687c/- |
| Rv1974/- | (cc=0.6183) | info on Rv1974/- |
| Rv1834/lipZ | (cc=0.6178) | info on Rv1834/lipZ |
| Rv0136/cyp138 | (cc=0.6164) | info on Rv0136/cyp138 |
Correlation of Rv2636/- with Rv1834/lipZ
Normalized LFCs for Rv2636/-:
(description and provenance of datasets)
| Rv2636/- | Rv1834/lipZ | |
| Fe_supp_jason_reseq | -0.073 | -1.206 |
| low_pH_jason_reseq | -0.942 | -1.429 |
| NO_jason_reseq | 0.071 | -0.118 |
| B6_jason_reseq | 1.243 | -0.153 |
| MHCII_jason_reseq | 1.783 | 0.675 |
| Isoniazid02 | -0.55 | 0.067 |
| Rifampicin4 | 0.162 | -0.753 |
| Ethambutol3 | 0.417 | -0.409 |
| Meropenem3 | -1.06 | 0.544 |
| Vancomycin16 | -0.642 | -0.589 |
| Rv2680_day32 | 1.092 | 0.179 |
| H37Rv_KO_MarP | 0.013 | -0.199 |
| hypoxia_3wks | 0.056 | -0.494 |
| hypoxia_6wks | -0.186 | 0.693 |
| glycerol | 0.263 | 1.011 |
| cholesterol | 0.048 | -0.287 |
| AJ | 0.345 | 0.183 |
| Bibs02 | 0.177 | 0.154 |
| Bibs02c | 0.358 | 1.15 |
| BL6 | -0.987 | -1.02 |
| BL6a | -0.442 | -0.023 |
| BXD01 | -1.222 | -1.259 |
| BXD010 | -0.989 | -2.69 |
| BXD011 | -1.507 | -1.546 |
| BXD03 | -1.037 | -2.962 |
| BXD04 | -1.588 | -2.493 |
| BXD05 | -0.968 | -1.942 |
| BXD06 | -1.495 | -1.572 |
| BXD07 | -1.077 | -1.875 |
| BXD08 | -0.781 | -1.191 |
| BXD09 | -1.87 | -2.028 |
| CAST | 0.174 | 0.766 |
| CCcont | -1.767 | -1.2 |
| DS01 | 0.399 | 0.147 |
| DS02 | 0.578 | -0.199 |
| DS04 | -0.409 | 0.132 |
| DS0c | 0.083 | -0.143 |
| GP01 | -0.456 | -0.122 |
| GP02 | -0.744 | -0.415 |
| GP0c | -0.677 | -0.737 |
| NOD | 0.574 | 0.353 |
| NZO | 0.126 | 0.069 |
| PWK | -0.057 | 0.318 |
| H37Rv_KO_CtpC | -1.77 | -0.245 |
| H37Rv_KO_CtpD | -0.581 | -0.316 |
| H37Rv_KO_Rv1272 | -1.089 | -0.745 |
| H37Rv_KO_SugABC | -1.719 | -0.204 |
| H37Rv_KO_MbtN | -0.848 | 0.75 |
| Trans05 | -0.088 | -0.469 |
| macrophage_unactivated | -0.653 | -1.569 |
| IL1 | -0.445 | -0.059 |
| Rapamycin | -0.546 | -1.525 |
| Tcell | -0.867 | -1.098 |
| GMCSF | -0.446 | 0.85 |
| IFNab | -1.155 | -1.953 |
| IFNg | -0.136 | -1.328 |
| IFNg_GMCSF1 | -0.079 | -0.679 |
| Rv1432_day32 | -0.16 | 0.674 |
| Rv1565c_day32 | 0.062 | 0.971 |
| secA2_input | 1.133 | 0.218 |
| delta_Rv3594 | -0.601 | -0.541 |
| delta_Rv3717 | -0.271 | -0.18 |
| delta_Rv3811 | -0.458 | -0.039 |
| delta_Rv0954 | 0.151 | -0.012 |
| PonA1 | -0.324 | -0.039 |
| EccD1_KO | -0.151 | 0.881 |
| EspI_KO | 0.271 | 0.607 |
| PE35_KO | -0.079 | 0.125 |
| PPE68_KO | -0.266 | -0.141 |
| glycerol2 | 0.534 | 0.893 |
| lignocerate | 0.498 | 0.955 |
| oleate | 0.303 | -0.157 |
| phosphatidylcholine | 0.709 | 0.609 |
| acetate | 0.156 | 1.199 |
| glucAc | 0.155 | 1.101 |
| Rv0950ko | -0.027 | 0.401 |
| Rv1096ko | -0.25 | 0.67 |
| Rv3684ko | -0.662 | 0.282 |
| delta_otsA_trehalose | 0.719 | 0.908 |