Top 10 genes with highest correlation to Rv2636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3354/- | (cc=0.6983) | info on Rv3354/- |
| Rv1180/pks3 | (cc=0.6564) | info on Rv1180/pks3 |
| Rv3295/- | (cc=0.6491) | info on Rv3295/- |
| Rv1181/pks4 | (cc=0.6488) | info on Rv1181/pks4 |
| Rv2032/acg | (cc=0.6246) | info on Rv2032/acg |
| Rv1999c/- | (cc=0.6215) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.6201) | info on Rv2687c/- |
| Rv1974/- | (cc=0.6183) | info on Rv1974/- |
| Rv1834/lipZ | (cc=0.6178) | info on Rv1834/lipZ |
| Rv0136/cyp138 | (cc=0.6164) | info on Rv0136/cyp138 |
Correlation of Rv2636/- with Rv1181/pks4
Normalized LFCs for Rv2636/-:
(description and provenance of datasets)
| Rv2636/- | Rv1181/pks4 | |
| Fe_supp_jason_reseq | -0.073 | -0.508 |
| low_pH_jason_reseq | -0.942 | 0.179 |
| NO_jason_reseq | 0.071 | -0.564 |
| B6_jason_reseq | 1.243 | 1.952 |
| MHCII_jason_reseq | 1.783 | 2.203 |
| Isoniazid02 | -0.55 | 0.244 |
| Rifampicin4 | 0.162 | -0.165 |
| Ethambutol3 | 0.417 | 0.687 |
| Meropenem3 | -1.06 | 0.137 |
| Vancomycin16 | -0.642 | 0.255 |
| Rv2680_day32 | 1.092 | -0.253 |
| H37Rv_KO_MarP | 0.013 | 0.21 |
| hypoxia_3wks | 0.056 | -0.283 |
| hypoxia_6wks | -0.186 | -0.088 |
| glycerol | 0.263 | 0.721 |
| cholesterol | 0.048 | 0.512 |
| AJ | 0.345 | 0.508 |
| Bibs02 | 0.177 | 0.011 |
| Bibs02c | 0.358 | -0.035 |
| BL6 | -0.987 | -1.076 |
| BL6a | -0.442 | -0.562 |
| BXD01 | -1.222 | -2.015 |
| BXD010 | -0.989 | -0.893 |
| BXD011 | -1.507 | -1.018 |
| BXD03 | -1.037 | -1.344 |
| BXD04 | -1.588 | -1.303 |
| BXD05 | -0.968 | -0.967 |
| BXD06 | -1.495 | -1.624 |
| BXD07 | -1.077 | -1.523 |
| BXD08 | -0.781 | -1.691 |
| BXD09 | -1.87 | -1.545 |
| CAST | 0.174 | -0.025 |
| CCcont | -1.767 | -1.157 |
| DS01 | 0.399 | 0.026 |
| DS02 | 0.578 | -0.098 |
| DS04 | -0.409 | -0.468 |
| DS0c | 0.083 | -0.061 |
| GP01 | -0.456 | -1.655 |
| GP02 | -0.744 | -1.466 |
| GP0c | -0.677 | -1.95 |
| NOD | 0.574 | 0.259 |
| NZO | 0.126 | 0.107 |
| PWK | -0.057 | 0.638 |
| H37Rv_KO_CtpC | -1.77 | -1.24 |
| H37Rv_KO_CtpD | -0.581 | -1.259 |
| H37Rv_KO_Rv1272 | -1.089 | -1.596 |
| H37Rv_KO_SugABC | -1.719 | -0.505 |
| H37Rv_KO_MbtN | -0.848 | -0.472 |
| Trans05 | -0.088 | -0.869 |
| macrophage_unactivated | -0.653 | -1.973 |
| IL1 | -0.445 | -0.169 |
| Rapamycin | -0.546 | 0.034 |
| Tcell | -0.867 | -2.512 |
| GMCSF | -0.446 | -1.838 |
| IFNab | -1.155 | -0.822 |
| IFNg | -0.136 | -0.764 |
| IFNg_GMCSF1 | -0.079 | -0.77 |
| Rv1432_day32 | -0.16 | -0.459 |
| Rv1565c_day32 | 0.062 | -0.63 |
| secA2_input | 1.133 | -0.373 |
| delta_Rv3594 | -0.601 | 0.416 |
| delta_Rv3717 | -0.271 | -0.106 |
| delta_Rv3811 | -0.458 | 0.193 |
| delta_Rv0954 | 0.151 | -0.305 |
| PonA1 | -0.324 | -0.235 |
| EccD1_KO | -0.151 | -0.776 |
| EspI_KO | 0.271 | -0.673 |
| PE35_KO | -0.079 | -0.16 |
| PPE68_KO | -0.266 | -0.269 |
| glycerol2 | 0.534 | -0.144 |
| lignocerate | 0.498 | 1.277 |
| oleate | 0.303 | -0.865 |
| phosphatidylcholine | 0.709 | -0.024 |
| acetate | 0.156 | 0.309 |
| glucAc | 0.155 | 0.363 |
| Rv0950ko | -0.027 | -0.084 |
| Rv1096ko | -0.25 | 1.294 |
| Rv3684ko | -0.662 | 0.265 |
| delta_otsA_trehalose | 0.719 | 1.196 |