Top 10 genes with highest correlation to Rv2636/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3354/- | (cc=0.6983) | info on Rv3354/- |
| Rv1180/pks3 | (cc=0.6564) | info on Rv1180/pks3 |
| Rv3295/- | (cc=0.6491) | info on Rv3295/- |
| Rv1181/pks4 | (cc=0.6488) | info on Rv1181/pks4 |
| Rv2032/acg | (cc=0.6246) | info on Rv2032/acg |
| Rv1999c/- | (cc=0.6215) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.6201) | info on Rv2687c/- |
| Rv1974/- | (cc=0.6183) | info on Rv1974/- |
| Rv1834/lipZ | (cc=0.6178) | info on Rv1834/lipZ |
| Rv0136/cyp138 | (cc=0.6164) | info on Rv0136/cyp138 |
Correlation of Rv2636/- with Rv1180/pks3
Normalized LFCs for Rv2636/-:
(description and provenance of datasets)
| Rv2636/- | Rv1180/pks3 | |
| Fe_supp_jason_reseq | -0.073 | -0.279 |
| low_pH_jason_reseq | -0.942 | 2.652 |
| NO_jason_reseq | 0.071 | 0.0 |
| B6_jason_reseq | 1.243 | 2.843 |
| MHCII_jason_reseq | 1.783 | 3.318 |
| Isoniazid02 | -0.55 | -0.345 |
| Rifampicin4 | 0.162 | -0.374 |
| Ethambutol3 | 0.417 | 0.176 |
| Meropenem3 | -1.06 | -0.865 |
| Vancomycin16 | -0.642 | 0.225 |
| Rv2680_day32 | 1.092 | -0.493 |
| H37Rv_KO_MarP | 0.013 | 0.415 |
| hypoxia_3wks | 0.056 | -0.319 |
| hypoxia_6wks | -0.186 | 0.234 |
| glycerol | 0.263 | -0.016 |
| cholesterol | 0.048 | 0.163 |
| AJ | 0.345 | 0.356 |
| Bibs02 | 0.177 | -0.254 |
| Bibs02c | 0.358 | 0.646 |
| BL6 | -0.987 | -2.892 |
| BL6a | -0.442 | -0.405 |
| BXD01 | -1.222 | -2.644 |
| BXD010 | -0.989 | -1.603 |
| BXD011 | -1.507 | -2.421 |
| BXD03 | -1.037 | -1.964 |
| BXD04 | -1.588 | -1.702 |
| BXD05 | -0.968 | -1.519 |
| BXD06 | -1.495 | -2.271 |
| BXD07 | -1.077 | -2.302 |
| BXD08 | -0.781 | -2.404 |
| BXD09 | -1.87 | -2.206 |
| CAST | 0.174 | 0.307 |
| CCcont | -1.767 | -2.242 |
| DS01 | 0.399 | 0.371 |
| DS02 | 0.578 | 0.298 |
| DS04 | -0.409 | 0.292 |
| DS0c | 0.083 | 0.093 |
| GP01 | -0.456 | -1.877 |
| GP02 | -0.744 | -1.623 |
| GP0c | -0.677 | -3.264 |
| NOD | 0.574 | -0.194 |
| NZO | 0.126 | 0.069 |
| PWK | -0.057 | 0.374 |
| H37Rv_KO_CtpC | -1.77 | -1.492 |
| H37Rv_KO_CtpD | -0.581 | -2.799 |
| H37Rv_KO_Rv1272 | -1.089 | -2.581 |
| H37Rv_KO_SugABC | -1.719 | -1.747 |
| H37Rv_KO_MbtN | -0.848 | -1.345 |
| Trans05 | -0.088 | -1.761 |
| macrophage_unactivated | -0.653 | -3.27 |
| IL1 | -0.445 | -2.174 |
| Rapamycin | -0.546 | -1.534 |
| Tcell | -0.867 | -3.454 |
| GMCSF | -0.446 | -2.609 |
| IFNab | -1.155 | -2.276 |
| IFNg | -0.136 | -3.175 |
| IFNg_GMCSF1 | -0.079 | -1.518 |
| Rv1432_day32 | -0.16 | 0.411 |
| Rv1565c_day32 | 0.062 | 0.692 |
| secA2_input | 1.133 | 0.944 |
| delta_Rv3594 | -0.601 | 0.2 |
| delta_Rv3717 | -0.271 | -1.016 |
| delta_Rv3811 | -0.458 | -1.142 |
| delta_Rv0954 | 0.151 | -1.262 |
| PonA1 | -0.324 | 0.077 |
| EccD1_KO | -0.151 | 1.457 |
| EspI_KO | 0.271 | -0.106 |
| PE35_KO | -0.079 | 0.694 |
| PPE68_KO | -0.266 | 0.557 |
| glycerol2 | 0.534 | -0.684 |
| lignocerate | 0.498 | 0.737 |
| oleate | 0.303 | -0.489 |
| phosphatidylcholine | 0.709 | -0.066 |
| acetate | 0.156 | -0.299 |
| glucAc | 0.155 | -0.016 |
| Rv0950ko | -0.027 | 1.227 |
| Rv1096ko | -0.25 | 0.826 |
| Rv3684ko | -0.662 | 0.419 |
| delta_otsA_trehalose | 0.719 | 0.724 |