Top 10 genes with highest correlation to Rv2530c/vapC39:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2735c/- | (cc=0.6582) | info on Rv2735c/- |
| Rv2160c/- | (cc=0.6541) | info on Rv2160c/- |
| Rv2757c/vapC21 | (cc=0.5878) | info on Rv2757c/vapC21 |
| Rv1505c/- | (cc=0.584) | info on Rv1505c/- |
| Rv1059/- | (cc=0.5835) | info on Rv1059/- |
| Rv3116/moeB2 | (cc=0.5476) | info on Rv3116/moeB2 |
| Rv2129c/- | (cc=0.5463) | info on Rv2129c/- |
| Rv1918c/PPE35 | (cc=0.5343) | info on Rv1918c/PPE35 |
| Rv1521/fadD25 | (cc=0.5333) | info on Rv1521/fadD25 |
| Rv0469/umaA | (cc=0.5332) | info on Rv0469/umaA |
Correlation of Rv2530c/vapC39 with Rv2129c/-
Normalized LFCs for Rv2530c/vapC39:
(description and provenance of datasets)
| Rv2530c/vapC39 | Rv2129c/- | |
| Fe_supp_jason_reseq | 2.021 | 0.497 |
| low_pH_jason_reseq | 1.586 | 0.146 |
| NO_jason_reseq | -0.281 | -0.244 |
| B6_jason_reseq | -0.538 | -0.487 |
| MHCII_jason_reseq | -0.217 | -0.909 |
| Isoniazid02 | 0.546 | -0.275 |
| Rifampicin4 | 0.474 | 0.301 |
| Ethambutol3 | -0.089 | 0.261 |
| Meropenem3 | -0.053 | -0.302 |
| Vancomycin16 | 1.305 | 0.353 |
| Rv2680_day32 | 1.701 | -1.274 |
| H37Rv_KO_MarP | -0.165 | -0.158 |
| hypoxia_3wks | 0.187 | 0.132 |
| hypoxia_6wks | -0.228 | -0.088 |
| glycerol | 1.463 | -0.424 |
| cholesterol | 0.0 | -0.445 |
| AJ | 0.0 | -0.113 |
| Bibs02 | 0.0 | -0.301 |
| Bibs02c | 0.0 | -1.02 |
| BL6 | 0.0 | -1.14 |
| BL6a | 3.566 | -0.019 |
| BXD01 | 3.731 | 0.107 |
| BXD010 | 3.969 | 0.884 |
| BXD011 | 2.955 | 0.999 |
| BXD03 | 1.849 | 0.88 |
| BXD04 | 2.75 | 0.124 |
| BXD05 | 3.385 | 0.298 |
| BXD06 | 3.49 | 0.702 |
| BXD07 | 3.809 | 0.543 |
| BXD08 | 2.491 | 0.45 |
| BXD09 | 3.016 | 0.586 |
| CAST | 0.23 | -0.889 |
| CCcont | 0.285 | -0.895 |
| DS01 | 0.0 | -0.756 |
| DS02 | 0.0 | -1.093 |
| DS04 | 0.533 | -0.018 |
| DS0c | 0.0 | -0.96 |
| GP01 | 1.43 | -0.481 |
| GP02 | 2.139 | -1.021 |
| GP0c | 3.221 | -0.012 |
| NOD | 0.225 | -1.095 |
| NZO | 0.0 | -0.562 |
| PWK | 0.0 | -1.016 |
| H37Rv_KO_CtpC | 4.288 | 0.883 |
| H37Rv_KO_CtpD | 5.372 | 1.139 |
| H37Rv_KO_Rv1272 | 0.495 | 0.798 |
| H37Rv_KO_SugABC | 0.272 | 1.128 |
| H37Rv_KO_MbtN | 0.437 | 1.637 |
| Trans05 | 4.469 | 0.174 |
| macrophage_unactivated | 2.5 | 0.215 |
| IL1 | 0.492 | 0.727 |
| Rapamycin | 0.411 | 0.236 |
| Tcell | 2.9 | -0.13 |
| GMCSF | -1.735 | 0.755 |
| IFNab | 1.587 | 0.399 |
| IFNg | -0.294 | -0.216 |
| IFNg_GMCSF1 | 3.086 | -0.126 |
| Rv1432_day32 | 0.0 | 0.263 |
| Rv1565c_day32 | 0.218 | -0.22 |
| secA2_input | 0.294 | -0.578 |
| delta_Rv3594 | 1.667 | 0.505 |
| delta_Rv3717 | 0.635 | 0.385 |
| delta_Rv3811 | 2.214 | -0.089 |
| delta_Rv0954 | 1.858 | 0.354 |
| PonA1 | 3.233 | 0.0 |
| EccD1_KO | -2.684 | -1.677 |
| EspI_KO | 1.241 | -1.064 |
| PE35_KO | 0.823 | -0.989 |
| PPE68_KO | -0.106 | -1.085 |
| glycerol2 | -0.42 | -0.276 |
| lignocerate | -1.112 | -1.167 |
| oleate | 1.036 | 0.116 |
| phosphatidylcholine | 0.366 | -0.381 |
| acetate | -1.44 | -1.99 |
| glucAc | -3.978 | -2.429 |
| Rv0950ko | 0.691 | 0.467 |
| Rv1096ko | 0.513 | 0.389 |
| Rv3684ko | -0.305 | -0.033 |
| delta_otsA_trehalose | -0.503 | 0.013 |