Top 10 genes with highest correlation to Rv2530c/vapC39:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2735c/- | (cc=0.6582) | info on Rv2735c/- |
| Rv2160c/- | (cc=0.6541) | info on Rv2160c/- |
| Rv2757c/vapC21 | (cc=0.5878) | info on Rv2757c/vapC21 |
| Rv1505c/- | (cc=0.584) | info on Rv1505c/- |
| Rv1059/- | (cc=0.5835) | info on Rv1059/- |
| Rv3116/moeB2 | (cc=0.5476) | info on Rv3116/moeB2 |
| Rv2129c/- | (cc=0.5463) | info on Rv2129c/- |
| Rv1918c/PPE35 | (cc=0.5343) | info on Rv1918c/PPE35 |
| Rv1521/fadD25 | (cc=0.5333) | info on Rv1521/fadD25 |
| Rv0469/umaA | (cc=0.5332) | info on Rv0469/umaA |
Correlation of Rv2530c/vapC39 with Rv1918c/PPE35
Normalized LFCs for Rv2530c/vapC39:
(description and provenance of datasets)
| Rv2530c/vapC39 | Rv1918c/PPE35 | |
| Fe_supp_jason_reseq | 2.021 | 0.426 |
| low_pH_jason_reseq | 1.586 | -0.127 |
| NO_jason_reseq | -0.281 | -0.326 |
| B6_jason_reseq | -0.538 | -0.212 |
| MHCII_jason_reseq | -0.217 | -0.42 |
| Isoniazid02 | 0.546 | 0.439 |
| Rifampicin4 | 0.474 | 0.463 |
| Ethambutol3 | -0.089 | 0.449 |
| Meropenem3 | -0.053 | 0.129 |
| Vancomycin16 | 1.305 | 0.18 |
| Rv2680_day32 | 1.701 | -0.526 |
| H37Rv_KO_MarP | -0.165 | -0.339 |
| hypoxia_3wks | 0.187 | 0.06 |
| hypoxia_6wks | -0.228 | -0.031 |
| glycerol | 1.463 | -0.671 |
| cholesterol | 0.0 | 0.318 |
| AJ | 0.0 | 0.432 |
| Bibs02 | 0.0 | 0.189 |
| Bibs02c | 0.0 | 0.083 |
| BL6 | 0.0 | 0.442 |
| BL6a | 3.566 | 0.641 |
| BXD01 | 3.731 | 0.383 |
| BXD010 | 3.969 | 0.525 |
| BXD011 | 2.955 | 0.747 |
| BXD03 | 1.849 | 0.904 |
| BXD04 | 2.75 | 0.687 |
| BXD05 | 3.385 | 0.8 |
| BXD06 | 3.49 | 0.584 |
| BXD07 | 3.809 | 0.666 |
| BXD08 | 2.491 | 0.605 |
| BXD09 | 3.016 | 0.602 |
| CAST | 0.23 | 0.21 |
| CCcont | 0.285 | 0.226 |
| DS01 | 0.0 | 0.185 |
| DS02 | 0.0 | 0.17 |
| DS04 | 0.533 | 0.128 |
| DS0c | 0.0 | 0.058 |
| GP01 | 1.43 | 0.102 |
| GP02 | 2.139 | 0.421 |
| GP0c | 3.221 | 0.658 |
| NOD | 0.225 | 0.286 |
| NZO | 0.0 | 0.23 |
| PWK | 0.0 | 0.153 |
| H37Rv_KO_CtpC | 4.288 | 0.711 |
| H37Rv_KO_CtpD | 5.372 | 1.161 |
| H37Rv_KO_Rv1272 | 0.495 | 1.414 |
| H37Rv_KO_SugABC | 0.272 | 0.711 |
| H37Rv_KO_MbtN | 0.437 | 1.033 |
| Trans05 | 4.469 | 1.383 |
| macrophage_unactivated | 2.5 | 0.533 |
| IL1 | 0.492 | 0.329 |
| Rapamycin | 0.411 | 0.411 |
| Tcell | 2.9 | 0.437 |
| GMCSF | -1.735 | 0.354 |
| IFNab | 1.587 | 0.151 |
| IFNg | -0.294 | 0.166 |
| IFNg_GMCSF1 | 3.086 | 0.738 |
| Rv1432_day32 | 0.0 | 0.562 |
| Rv1565c_day32 | 0.218 | -0.227 |
| secA2_input | 0.294 | -0.441 |
| delta_Rv3594 | 1.667 | -0.106 |
| delta_Rv3717 | 0.635 | -0.257 |
| delta_Rv3811 | 2.214 | 0.366 |
| delta_Rv0954 | 1.858 | 0.014 |
| PonA1 | 3.233 | -0.22 |
| EccD1_KO | -2.684 | -0.572 |
| EspI_KO | 1.241 | -0.365 |
| PE35_KO | 0.823 | -0.44 |
| PPE68_KO | -0.106 | -0.518 |
| glycerol2 | -0.42 | -0.422 |
| lignocerate | -1.112 | -0.242 |
| oleate | 1.036 | -0.041 |
| phosphatidylcholine | 0.366 | -0.21 |
| acetate | -1.44 | -0.47 |
| glucAc | -3.978 | -0.123 |
| Rv0950ko | 0.691 | -0.488 |
| Rv1096ko | 0.513 | -1.001 |
| Rv3684ko | -0.305 | -0.347 |
| delta_otsA_trehalose | -0.503 | -0.684 |