Top 10 genes with highest correlation to Rv2530c/vapC39:
update plot | correlation | link to info on gene |
---|---|---|
Rv2735c/- | (cc=0.6582) | info on Rv2735c/- |
Rv2160c/- | (cc=0.6541) | info on Rv2160c/- |
Rv2757c/vapC21 | (cc=0.5878) | info on Rv2757c/vapC21 |
Rv1505c/- | (cc=0.584) | info on Rv1505c/- |
Rv1059/- | (cc=0.5835) | info on Rv1059/- |
Rv3116/moeB2 | (cc=0.5476) | info on Rv3116/moeB2 |
Rv2129c/- | (cc=0.5463) | info on Rv2129c/- |
Rv1918c/PPE35 | (cc=0.5343) | info on Rv1918c/PPE35 |
Rv1521/fadD25 | (cc=0.5333) | info on Rv1521/fadD25 |
Rv0469/umaA | (cc=0.5332) | info on Rv0469/umaA |
Correlation of Rv2530c/vapC39 with Rv1059/-
Normalized LFCs for Rv2530c/vapC39:
(description and provenance of datasets)
Rv2530c/vapC39 | Rv1059/- | |
Fe_supp_jason_reseq | 2.021 | 0.182 |
low_pH_jason_reseq | 1.586 | 0.371 |
NO_jason_reseq | -0.281 | 0.302 |
B6_jason_reseq | -0.538 | -1.402 |
MHCII_jason_reseq | -0.217 | -1.842 |
Isoniazid02 | 0.546 | -0.509 |
Rifampicin4 | 0.474 | -0.582 |
Ethambutol3 | -0.089 | -0.685 |
Meropenem3 | -0.053 | 0.94 |
Vancomycin16 | 1.305 | -0.639 |
Rv2680_day32 | 1.701 | -2.147 |
H37Rv_KO_MarP | -0.165 | 0.178 |
hypoxia_3wks | 0.187 | 0.642 |
hypoxia_6wks | -0.228 | 0.639 |
glycerol | 1.463 | -1.121 |
cholesterol | 0.0 | -0.294 |
AJ | 0.0 | -0.65 |
Bibs02 | 0.0 | 1.021 |
Bibs02c | 0.0 | -0.587 |
BL6 | 0.0 | 1.992 |
BL6a | 3.566 | 2.468 |
BXD01 | 3.731 | 2.452 |
BXD010 | 3.969 | 2.106 |
BXD011 | 2.955 | 2.436 |
BXD03 | 1.849 | 3.572 |
BXD04 | 2.75 | 2.353 |
BXD05 | 3.385 | 2.247 |
BXD06 | 3.49 | 2.654 |
BXD07 | 3.809 | 2.607 |
BXD08 | 2.491 | 2.531 |
BXD09 | 3.016 | 2.688 |
CAST | 0.23 | 1.023 |
CCcont | 0.285 | 2.164 |
DS01 | 0.0 | 0.522 |
DS02 | 0.0 | 0.369 |
DS04 | 0.533 | 0.225 |
DS0c | 0.0 | 2.858 |
GP01 | 1.43 | 1.636 |
GP02 | 2.139 | 1.944 |
GP0c | 3.221 | 0.981 |
NOD | 0.225 | 0.133 |
NZO | 0.0 | -1.107 |
PWK | 0.0 | 0.433 |
H37Rv_KO_CtpC | 4.288 | 2.426 |
H37Rv_KO_CtpD | 5.372 | 2.855 |
H37Rv_KO_Rv1272 | 0.495 | 1.834 |
H37Rv_KO_SugABC | 0.272 | 2.796 |
H37Rv_KO_MbtN | 0.437 | 0.611 |
Trans05 | 4.469 | 3.009 |
macrophage_unactivated | 2.5 | 2.197 |
IL1 | 0.492 | 0.635 |
Rapamycin | 0.411 | -0.043 |
Tcell | 2.9 | 0.046 |
GMCSF | -1.735 | 0.327 |
IFNab | 1.587 | -0.178 |
IFNg | -0.294 | -0.238 |
IFNg_GMCSF1 | 3.086 | -0.377 |
Rv1432_day32 | 0.0 | -1.635 |
Rv1565c_day32 | 0.218 | -0.218 |
secA2_input | 0.294 | -2.481 |
delta_Rv3594 | 1.667 | 0.872 |
delta_Rv3717 | 0.635 | -0.365 |
delta_Rv3811 | 2.214 | 1.246 |
delta_Rv0954 | 1.858 | 0.952 |
PonA1 | 3.233 | 0.0 |
EccD1_KO | -2.684 | -0.069 |
EspI_KO | 1.241 | 0.394 |
PE35_KO | 0.823 | -1.768 |
PPE68_KO | -0.106 | -0.56 |
glycerol2 | -0.42 | -0.37 |
lignocerate | -1.112 | -0.856 |
oleate | 1.036 | 0.272 |
phosphatidylcholine | 0.366 | -0.204 |
acetate | -1.44 | -0.871 |
glucAc | -3.978 | -1.382 |
Rv0950ko | 0.691 | -1.393 |
Rv1096ko | 0.513 | -1.915 |
Rv3684ko | -0.305 | -1.883 |
delta_otsA_trehalose | -0.503 | -0.675 |