Top 10 genes with highest correlation to Rv2530c/vapC39:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2735c/- | (cc=0.6582) | info on Rv2735c/- |
| Rv2160c/- | (cc=0.6541) | info on Rv2160c/- |
| Rv2757c/vapC21 | (cc=0.5878) | info on Rv2757c/vapC21 |
| Rv1505c/- | (cc=0.584) | info on Rv1505c/- |
| Rv1059/- | (cc=0.5835) | info on Rv1059/- |
| Rv3116/moeB2 | (cc=0.5476) | info on Rv3116/moeB2 |
| Rv2129c/- | (cc=0.5463) | info on Rv2129c/- |
| Rv1918c/PPE35 | (cc=0.5343) | info on Rv1918c/PPE35 |
| Rv1521/fadD25 | (cc=0.5333) | info on Rv1521/fadD25 |
| Rv0469/umaA | (cc=0.5332) | info on Rv0469/umaA |
Correlation of Rv2530c/vapC39 with Rv1505c/-
Normalized LFCs for Rv2530c/vapC39:
(description and provenance of datasets)
| Rv2530c/vapC39 | Rv1505c/- | |
| Fe_supp_jason_reseq | 2.021 | 0.398 |
| low_pH_jason_reseq | 1.586 | -0.35 |
| NO_jason_reseq | -0.281 | 0.247 |
| B6_jason_reseq | -0.538 | -1.795 |
| MHCII_jason_reseq | -0.217 | -1.356 |
| Isoniazid02 | 0.546 | 1.695 |
| Rifampicin4 | 0.474 | -0.244 |
| Ethambutol3 | -0.089 | 0.896 |
| Meropenem3 | -0.053 | -0.284 |
| Vancomycin16 | 1.305 | 0.0 |
| Rv2680_day32 | 1.701 | -0.332 |
| H37Rv_KO_MarP | -0.165 | -0.579 |
| hypoxia_3wks | 0.187 | -0.144 |
| hypoxia_6wks | -0.228 | 0.0 |
| glycerol | 1.463 | -0.396 |
| cholesterol | 0.0 | -0.847 |
| AJ | 0.0 | -0.071 |
| Bibs02 | 0.0 | 0.604 |
| Bibs02c | 0.0 | -0.567 |
| BL6 | 0.0 | 1.544 |
| BL6a | 3.566 | 1.908 |
| BXD01 | 3.731 | 1.315 |
| BXD010 | 3.969 | 1.351 |
| BXD011 | 2.955 | 1.424 |
| BXD03 | 1.849 | 1.73 |
| BXD04 | 2.75 | 1.686 |
| BXD05 | 3.385 | 1.878 |
| BXD06 | 3.49 | 2.076 |
| BXD07 | 3.809 | 1.562 |
| BXD08 | 2.491 | 1.373 |
| BXD09 | 3.016 | 2.422 |
| CAST | 0.23 | 0.709 |
| CCcont | 0.285 | 1.366 |
| DS01 | 0.0 | 0.204 |
| DS02 | 0.0 | -1.511 |
| DS04 | 0.533 | 0.641 |
| DS0c | 0.0 | -0.506 |
| GP01 | 1.43 | 0.539 |
| GP02 | 2.139 | 0.938 |
| GP0c | 3.221 | 0.511 |
| NOD | 0.225 | 2.294 |
| NZO | 0.0 | -0.786 |
| PWK | 0.0 | 0.274 |
| H37Rv_KO_CtpC | 4.288 | 1.294 |
| H37Rv_KO_CtpD | 5.372 | 2.274 |
| H37Rv_KO_Rv1272 | 0.495 | 1.29 |
| H37Rv_KO_SugABC | 0.272 | -0.748 |
| H37Rv_KO_MbtN | 0.437 | 1.363 |
| Trans05 | 4.469 | 1.179 |
| macrophage_unactivated | 2.5 | 0.167 |
| IL1 | 0.492 | 0.489 |
| Rapamycin | 0.411 | 0.203 |
| Tcell | 2.9 | 0.73 |
| GMCSF | -1.735 | -0.219 |
| IFNab | 1.587 | 0.16 |
| IFNg | -0.294 | -0.072 |
| IFNg_GMCSF1 | 3.086 | 0.167 |
| Rv1432_day32 | 0.0 | 0.288 |
| Rv1565c_day32 | 0.218 | -0.292 |
| secA2_input | 0.294 | -1.018 |
| delta_Rv3594 | 1.667 | 0.197 |
| delta_Rv3717 | 0.635 | -0.56 |
| delta_Rv3811 | 2.214 | 0.223 |
| delta_Rv0954 | 1.858 | 0.656 |
| PonA1 | 3.233 | -0.164 |
| EccD1_KO | -2.684 | 0.059 |
| EspI_KO | 1.241 | -0.163 |
| PE35_KO | 0.823 | -0.055 |
| PPE68_KO | -0.106 | -0.368 |
| glycerol2 | -0.42 | -0.488 |
| lignocerate | -1.112 | -0.477 |
| oleate | 1.036 | -0.432 |
| phosphatidylcholine | 0.366 | -0.098 |
| acetate | -1.44 | -0.848 |
| glucAc | -3.978 | -1.106 |
| Rv0950ko | 0.691 | 0.6 |
| Rv1096ko | 0.513 | -0.525 |
| Rv3684ko | -0.305 | 0.311 |
| delta_otsA_trehalose | -0.503 | 1.395 |