Top 10 genes with highest correlation to Rv2503c/scoB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0366c/- | (cc=0.4639) | info on Rv0366c/- |
| Rv0470A/- | (cc=0.4432) | info on Rv0470A/- |
| Rv3704c/gshA | (cc=0.4152) | info on Rv3704c/gshA |
| Rv0271c/fadE6 | (cc=0.4106) | info on Rv0271c/fadE6 |
| Rv1641/infC | (cc=0.4019) | info on Rv1641/infC |
| Rv2407/- | (cc=0.3936) | info on Rv2407/- |
| Rv2370c/- | (cc=0.3929) | info on Rv2370c/- |
| Rv0735/sigL | (cc=0.3883) | info on Rv0735/sigL |
| Rv0375c/- | (cc=0.3881) | info on Rv0375c/- |
| Rv0401/- | (cc=0.3807) | info on Rv0401/- |
Correlation of Rv2503c/scoB with Rv2407/-
Normalized LFCs for Rv2503c/scoB:
(description and provenance of datasets)
| Rv2503c/scoB | Rv2407/- | |
| Fe_supp_jason_reseq | -1.71 | -0.867 |
| low_pH_jason_reseq | -0.375 | -0.539 |
| NO_jason_reseq | 0.234 | 0.071 |
| B6_jason_reseq | -1.097 | -0.483 |
| MHCII_jason_reseq | -0.528 | 0.108 |
| Isoniazid02 | -0.07 | 0.54 |
| Rifampicin4 | 0.29 | 0.154 |
| Ethambutol3 | 0.148 | 1.069 |
| Meropenem3 | 0.589 | 0.627 |
| Vancomycin16 | 1.244 | 0.608 |
| Rv2680_day32 | -0.119 | 0.851 |
| H37Rv_KO_MarP | 0.061 | -0.535 |
| hypoxia_3wks | 0.239 | -0.152 |
| hypoxia_6wks | -0.219 | -0.04 |
| glycerol | -0.575 | -0.118 |
| cholesterol | 0.301 | -0.351 |
| AJ | -0.906 | -0.437 |
| Bibs02 | -1.778 | 0.427 |
| Bibs02c | 0.547 | -0.3 |
| BL6 | -0.656 | -0.334 |
| BL6a | -0.158 | -0.433 |
| BXD01 | -1.364 | -0.348 |
| BXD010 | -3.07 | 0.124 |
| BXD011 | -0.794 | -0.259 |
| BXD03 | -1.732 | -0.135 |
| BXD04 | -1.903 | -1.257 |
| BXD05 | 0.291 | 0.107 |
| BXD06 | -1.033 | -0.532 |
| BXD07 | -0.99 | -0.1 |
| BXD08 | -0.698 | 0.175 |
| BXD09 | -0.693 | 0.192 |
| CAST | -1.031 | 0.128 |
| CCcont | -0.759 | -0.424 |
| DS01 | -1.023 | -0.373 |
| DS02 | -1.683 | -0.249 |
| DS04 | 0.701 | 0.492 |
| DS0c | -0.288 | -0.526 |
| GP01 | 0.166 | 1.309 |
| GP02 | -0.732 | -0.195 |
| GP0c | 0.219 | 0.276 |
| NOD | 1.354 | 1.054 |
| NZO | -1.28 | 0.217 |
| PWK | 0.695 | 0.098 |
| H37Rv_KO_CtpC | -1.88 | -0.14 |
| H37Rv_KO_CtpD | -0.114 | 0.537 |
| H37Rv_KO_Rv1272 | -1.853 | -0.037 |
| H37Rv_KO_SugABC | -0.415 | 0.897 |
| H37Rv_KO_MbtN | 0.685 | -0.125 |
| Trans05 | 0.025 | 0.414 |
| macrophage_unactivated | -0.701 | -0.716 |
| IL1 | -0.347 | -0.353 |
| Rapamycin | 0.169 | -0.15 |
| Tcell | 0.0 | -0.189 |
| GMCSF | 0.718 | -0.428 |
| IFNab | 0.0 | -0.423 |
| IFNg | 0.051 | 0.174 |
| IFNg_GMCSF1 | 0.173 | 0.456 |
| Rv1432_day32 | 0.0 | 0.623 |
| Rv1565c_day32 | 0.502 | 0.33 |
| secA2_input | 0.133 | 1.647 |
| delta_Rv3594 | -2.867 | -0.168 |
| delta_Rv3717 | 0.054 | 0.011 |
| delta_Rv3811 | -0.431 | -0.294 |
| delta_Rv0954 | -0.178 | -0.093 |
| PonA1 | -1.009 | -0.361 |
| EccD1_KO | -1.365 | 1.375 |
| EspI_KO | -0.984 | 1.124 |
| PE35_KO | -0.91 | 0.493 |
| PPE68_KO | -0.944 | 0.541 |
| glycerol2 | -0.647 | -0.105 |
| lignocerate | -0.603 | -0.012 |
| oleate | 0.096 | 0.238 |
| phosphatidylcholine | -0.647 | 0.099 |
| acetate | -0.515 | 0.151 |
| glucAc | -0.692 | 0.144 |
| Rv0950ko | 0.85 | 0.85 |
| Rv1096ko | 1.122 | 0.787 |
| Rv3684ko | 1.359 | 0.717 |
| delta_otsA_trehalose | 1.593 | 1.7 |