Top 10 genes with highest correlation to Rv2503c/scoB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0366c/- | (cc=0.4639) | info on Rv0366c/- |
| Rv0470A/- | (cc=0.4432) | info on Rv0470A/- |
| Rv3704c/gshA | (cc=0.4152) | info on Rv3704c/gshA |
| Rv0271c/fadE6 | (cc=0.4106) | info on Rv0271c/fadE6 |
| Rv1641/infC | (cc=0.4019) | info on Rv1641/infC |
| Rv2407/- | (cc=0.3936) | info on Rv2407/- |
| Rv2370c/- | (cc=0.3929) | info on Rv2370c/- |
| Rv0735/sigL | (cc=0.3883) | info on Rv0735/sigL |
| Rv0375c/- | (cc=0.3881) | info on Rv0375c/- |
| Rv0401/- | (cc=0.3807) | info on Rv0401/- |
Correlation of Rv2503c/scoB with Rv0470A/-
Normalized LFCs for Rv2503c/scoB:
(description and provenance of datasets)
| Rv2503c/scoB | Rv0470A/- | |
| Fe_supp_jason_reseq | -1.71 | -0.748 |
| low_pH_jason_reseq | -0.375 | -0.236 |
| NO_jason_reseq | 0.234 | -0.139 |
| B6_jason_reseq | -1.097 | 0.027 |
| MHCII_jason_reseq | -0.528 | 0.075 |
| Isoniazid02 | -0.07 | 1.019 |
| Rifampicin4 | 0.29 | 0.571 |
| Ethambutol3 | 0.148 | 0.776 |
| Meropenem3 | 0.589 | 1.85 |
| Vancomycin16 | 1.244 | 0.716 |
| Rv2680_day32 | -0.119 | -0.505 |
| H37Rv_KO_MarP | 0.061 | 0.686 |
| hypoxia_3wks | 0.239 | -0.415 |
| hypoxia_6wks | -0.219 | -1.401 |
| glycerol | -0.575 | -0.009 |
| cholesterol | 0.301 | -0.15 |
| AJ | -0.906 | -0.812 |
| Bibs02 | -1.778 | -0.099 |
| Bibs02c | 0.547 | 0.362 |
| BL6 | -0.656 | -1.052 |
| BL6a | -0.158 | -0.492 |
| BXD01 | -1.364 | -1.861 |
| BXD010 | -3.07 | -1.26 |
| BXD011 | -0.794 | -1.343 |
| BXD03 | -1.732 | -1.932 |
| BXD04 | -1.903 | -1.959 |
| BXD05 | 0.291 | -1.381 |
| BXD06 | -1.033 | -1.533 |
| BXD07 | -0.99 | -1.565 |
| BXD08 | -0.698 | -1.577 |
| BXD09 | -0.693 | -2.007 |
| CAST | -1.031 | 0.065 |
| CCcont | -0.759 | -0.641 |
| DS01 | -1.023 | 0.71 |
| DS02 | -1.683 | 0.714 |
| DS04 | 0.701 | 0.96 |
| DS0c | -0.288 | 0.658 |
| GP01 | 0.166 | -1.03 |
| GP02 | -0.732 | -0.776 |
| GP0c | 0.219 | -1.118 |
| NOD | 1.354 | 0.073 |
| NZO | -1.28 | -0.341 |
| PWK | 0.695 | -0.428 |
| H37Rv_KO_CtpC | -1.88 | -0.818 |
| H37Rv_KO_CtpD | -0.114 | 0.323 |
| H37Rv_KO_Rv1272 | -1.853 | -0.706 |
| H37Rv_KO_SugABC | -0.415 | -0.798 |
| H37Rv_KO_MbtN | 0.685 | -1.506 |
| Trans05 | 0.025 | -0.854 |
| macrophage_unactivated | -0.701 | -0.66 |
| IL1 | -0.347 | -0.46 |
| Rapamycin | 0.169 | -0.411 |
| Tcell | 0.0 | -0.593 |
| GMCSF | 0.718 | -0.232 |
| IFNab | 0.0 | -0.565 |
| IFNg | 0.051 | -0.802 |
| IFNg_GMCSF1 | 0.173 | -0.277 |
| Rv1432_day32 | 0.0 | -1.448 |
| Rv1565c_day32 | 0.502 | -0.329 |
| secA2_input | 0.133 | 0.534 |
| delta_Rv3594 | -2.867 | -1.834 |
| delta_Rv3717 | 0.054 | -1.651 |
| delta_Rv3811 | -0.431 | -1.517 |
| delta_Rv0954 | -0.178 | -0.099 |
| PonA1 | -1.009 | -0.293 |
| EccD1_KO | -1.365 | -0.753 |
| EspI_KO | -0.984 | -0.742 |
| PE35_KO | -0.91 | -0.633 |
| PPE68_KO | -0.944 | -0.909 |
| glycerol2 | -0.647 | 0.611 |
| lignocerate | -0.603 | 0.497 |
| oleate | 0.096 | 0.214 |
| phosphatidylcholine | -0.647 | 0.336 |
| acetate | -0.515 | -0.04 |
| glucAc | -0.692 | -0.321 |
| Rv0950ko | 0.85 | 1.113 |
| Rv1096ko | 1.122 | 0.893 |
| Rv3684ko | 1.359 | 0.678 |
| delta_otsA_trehalose | 1.593 | 0.027 |