Top 10 genes with highest correlation to Rv2503c/scoB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0366c/- | (cc=0.4639) | info on Rv0366c/- |
| Rv0470A/- | (cc=0.4432) | info on Rv0470A/- |
| Rv3704c/gshA | (cc=0.4152) | info on Rv3704c/gshA |
| Rv0271c/fadE6 | (cc=0.4106) | info on Rv0271c/fadE6 |
| Rv1641/infC | (cc=0.4019) | info on Rv1641/infC |
| Rv2407/- | (cc=0.3936) | info on Rv2407/- |
| Rv2370c/- | (cc=0.3929) | info on Rv2370c/- |
| Rv0735/sigL | (cc=0.3883) | info on Rv0735/sigL |
| Rv0375c/- | (cc=0.3881) | info on Rv0375c/- |
| Rv0401/- | (cc=0.3807) | info on Rv0401/- |
Correlation of Rv2503c/scoB with Rv0735/sigL
Normalized LFCs for Rv2503c/scoB:
(description and provenance of datasets)
| Rv2503c/scoB | Rv0735/sigL | |
| Fe_supp_jason_reseq | -1.71 | -0.268 |
| low_pH_jason_reseq | -0.375 | -0.597 |
| NO_jason_reseq | 0.234 | 0.48 |
| B6_jason_reseq | -1.097 | -0.421 |
| MHCII_jason_reseq | -0.528 | 0.474 |
| Isoniazid02 | -0.07 | 0.049 |
| Rifampicin4 | 0.29 | 0.341 |
| Ethambutol3 | 0.148 | -0.153 |
| Meropenem3 | 0.589 | 1.006 |
| Vancomycin16 | 1.244 | 0.615 |
| Rv2680_day32 | -0.119 | 0.092 |
| H37Rv_KO_MarP | 0.061 | -0.387 |
| hypoxia_3wks | 0.239 | -0.367 |
| hypoxia_6wks | -0.219 | -0.253 |
| glycerol | -0.575 | -0.29 |
| cholesterol | 0.301 | 0.004 |
| AJ | -0.906 | -0.546 |
| Bibs02 | -1.778 | 0.815 |
| Bibs02c | 0.547 | 0.197 |
| BL6 | -0.656 | -1.536 |
| BL6a | -0.158 | -0.011 |
| BXD01 | -1.364 | -0.605 |
| BXD010 | -3.07 | -0.48 |
| BXD011 | -0.794 | -0.372 |
| BXD03 | -1.732 | -0.565 |
| BXD04 | -1.903 | -0.673 |
| BXD05 | 0.291 | -0.008 |
| BXD06 | -1.033 | -0.855 |
| BXD07 | -0.99 | -0.261 |
| BXD08 | -0.698 | -0.162 |
| BXD09 | -0.693 | -0.526 |
| CAST | -1.031 | 0.007 |
| CCcont | -0.759 | -0.919 |
| DS01 | -1.023 | -0.604 |
| DS02 | -1.683 | -1.144 |
| DS04 | 0.701 | 0.079 |
| DS0c | -0.288 | -0.503 |
| GP01 | 0.166 | -0.37 |
| GP02 | -0.732 | -0.837 |
| GP0c | 0.219 | 0.079 |
| NOD | 1.354 | 0.283 |
| NZO | -1.28 | -0.35 |
| PWK | 0.695 | -0.257 |
| H37Rv_KO_CtpC | -1.88 | -1.598 |
| H37Rv_KO_CtpD | -0.114 | 0.373 |
| H37Rv_KO_Rv1272 | -1.853 | -1.283 |
| H37Rv_KO_SugABC | -0.415 | 0.172 |
| H37Rv_KO_MbtN | 0.685 | 0.67 |
| Trans05 | 0.025 | -1.206 |
| macrophage_unactivated | -0.701 | -0.698 |
| IL1 | -0.347 | -0.222 |
| Rapamycin | 0.169 | -0.015 |
| Tcell | 0.0 | -0.564 |
| GMCSF | 0.718 | -0.333 |
| IFNab | 0.0 | -0.311 |
| IFNg | 0.051 | -0.128 |
| IFNg_GMCSF1 | 0.173 | 0.408 |
| Rv1432_day32 | 0.0 | -0.329 |
| Rv1565c_day32 | 0.502 | 0.294 |
| secA2_input | 0.133 | -0.568 |
| delta_Rv3594 | -2.867 | -0.199 |
| delta_Rv3717 | 0.054 | -0.589 |
| delta_Rv3811 | -0.431 | -0.581 |
| delta_Rv0954 | -0.178 | -0.027 |
| PonA1 | -1.009 | -0.012 |
| EccD1_KO | -1.365 | -0.033 |
| EspI_KO | -0.984 | -0.228 |
| PE35_KO | -0.91 | -0.467 |
| PPE68_KO | -0.944 | -0.208 |
| glycerol2 | -0.647 | 0.118 |
| lignocerate | -0.603 | 0.0 |
| oleate | 0.096 | 0.587 |
| phosphatidylcholine | -0.647 | 0.276 |
| acetate | -0.515 | -0.603 |
| glucAc | -0.692 | 0.549 |
| Rv0950ko | 0.85 | -0.829 |
| Rv1096ko | 1.122 | -0.259 |
| Rv3684ko | 1.359 | 0.033 |
| delta_otsA_trehalose | 1.593 | 0.038 |