Top 10 genes with highest correlation to Rv2503c/scoB:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0366c/- | (cc=0.4639) | info on Rv0366c/- |
| Rv0470A/- | (cc=0.4432) | info on Rv0470A/- |
| Rv3704c/gshA | (cc=0.4152) | info on Rv3704c/gshA |
| Rv0271c/fadE6 | (cc=0.4106) | info on Rv0271c/fadE6 |
| Rv1641/infC | (cc=0.4019) | info on Rv1641/infC |
| Rv2407/- | (cc=0.3936) | info on Rv2407/- |
| Rv2370c/- | (cc=0.3929) | info on Rv2370c/- |
| Rv0735/sigL | (cc=0.3883) | info on Rv0735/sigL |
| Rv0375c/- | (cc=0.3881) | info on Rv0375c/- |
| Rv0401/- | (cc=0.3807) | info on Rv0401/- |
Correlation of Rv2503c/scoB with Rv2370c/-
Normalized LFCs for Rv2503c/scoB:
(description and provenance of datasets)
| Rv2503c/scoB | Rv2370c/- | |
| Fe_supp_jason_reseq | -1.71 | -0.983 |
| low_pH_jason_reseq | -0.375 | -0.176 |
| NO_jason_reseq | 0.234 | 0.512 |
| B6_jason_reseq | -1.097 | -0.335 |
| MHCII_jason_reseq | -0.528 | -0.129 |
| Isoniazid02 | -0.07 | 0.54 |
| Rifampicin4 | 0.29 | 0.276 |
| Ethambutol3 | 0.148 | -0.085 |
| Meropenem3 | 0.589 | 0.276 |
| Vancomycin16 | 1.244 | 0.454 |
| Rv2680_day32 | -0.119 | 0.689 |
| H37Rv_KO_MarP | 0.061 | -0.205 |
| hypoxia_3wks | 0.239 | -0.455 |
| hypoxia_6wks | -0.219 | 0.081 |
| glycerol | -0.575 | -0.12 |
| cholesterol | 0.301 | -0.624 |
| AJ | -0.906 | -0.012 |
| Bibs02 | -1.778 | -0.526 |
| Bibs02c | 0.547 | -0.092 |
| BL6 | -0.656 | -0.87 |
| BL6a | -0.158 | -0.191 |
| BXD01 | -1.364 | -0.64 |
| BXD010 | -3.07 | 0.43 |
| BXD011 | -0.794 | -0.05 |
| BXD03 | -1.732 | -0.363 |
| BXD04 | -1.903 | -1.048 |
| BXD05 | 0.291 | 0.325 |
| BXD06 | -1.033 | -0.302 |
| BXD07 | -0.99 | 0.291 |
| BXD08 | -0.698 | -0.452 |
| BXD09 | -0.693 | -0.318 |
| CAST | -1.031 | -0.247 |
| CCcont | -0.759 | -0.904 |
| DS01 | -1.023 | -0.342 |
| DS02 | -1.683 | -0.544 |
| DS04 | 0.701 | 0.548 |
| DS0c | -0.288 | -0.327 |
| GP01 | 0.166 | 0.996 |
| GP02 | -0.732 | -0.842 |
| GP0c | 0.219 | -0.125 |
| NOD | 1.354 | -0.467 |
| NZO | -1.28 | -0.536 |
| PWK | 0.695 | -0.107 |
| H37Rv_KO_CtpC | -1.88 | 0.0 |
| H37Rv_KO_CtpD | -0.114 | 0.631 |
| H37Rv_KO_Rv1272 | -1.853 | 0.149 |
| H37Rv_KO_SugABC | -0.415 | 0.2 |
| H37Rv_KO_MbtN | 0.685 | 0.118 |
| Trans05 | 0.025 | -0.126 |
| macrophage_unactivated | -0.701 | 0.0 |
| IL1 | -0.347 | 0.267 |
| Rapamycin | 0.169 | 0.433 |
| Tcell | 0.0 | -0.091 |
| GMCSF | 0.718 | 0.304 |
| IFNab | 0.0 | 0.375 |
| IFNg | 0.051 | 0.802 |
| IFNg_GMCSF1 | 0.173 | 0.892 |
| Rv1432_day32 | 0.0 | -0.541 |
| Rv1565c_day32 | 0.502 | 0.512 |
| secA2_input | 0.133 | 0.44 |
| delta_Rv3594 | -2.867 | -0.289 |
| delta_Rv3717 | 0.054 | 0.174 |
| delta_Rv3811 | -0.431 | 0.036 |
| delta_Rv0954 | -0.178 | 0.216 |
| PonA1 | -1.009 | -0.351 |
| EccD1_KO | -1.365 | -0.059 |
| EspI_KO | -0.984 | 0.171 |
| PE35_KO | -0.91 | 0.271 |
| PPE68_KO | -0.944 | 0.298 |
| glycerol2 | -0.647 | -0.247 |
| lignocerate | -0.603 | 0.286 |
| oleate | 0.096 | -0.631 |
| phosphatidylcholine | -0.647 | -0.111 |
| acetate | -0.515 | 0.185 |
| glucAc | -0.692 | 0.126 |
| Rv0950ko | 0.85 | 0.522 |
| Rv1096ko | 1.122 | 0.793 |
| Rv3684ko | 1.359 | 0.413 |
| delta_otsA_trehalose | 1.593 | -0.1 |