Top 10 genes with highest correlation to Rv2419c/gpgP:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2563/- | (cc=0.531) | info on Rv2563/- |
| Rv0561c/- | (cc=0.5284) | info on Rv0561c/- |
| Rv1287/- | (cc=0.5156) | info on Rv1287/- |
| Rv2344c/dgt | (cc=0.5007) | info on Rv2344c/dgt |
| Rv1140/- | (cc=0.5) | info on Rv1140/- |
| Rv1095/phoH2 | (cc=0.4901) | info on Rv1095/phoH2 |
| Rv2258c/- | (cc=0.48) | info on Rv2258c/- |
| Rv3557c/- | (cc=0.4732) | info on Rv3557c/- |
| Rv1473/- | (cc=0.4728) | info on Rv1473/- |
| Rv3283/sseA | (cc=0.4722) | info on Rv3283/sseA |
Correlation of Rv2419c/gpgP with Rv1095/phoH2
Normalized LFCs for Rv2419c/gpgP:
(description and provenance of datasets)
| Rv2419c/gpgP | Rv1095/phoH2 | |
| Fe_supp_jason_reseq | 0.538 | 0.358 |
| low_pH_jason_reseq | 0.303 | 0.125 |
| NO_jason_reseq | -0.845 | 0.0 |
| B6_jason_reseq | -0.649 | -0.052 |
| MHCII_jason_reseq | -0.437 | 1.467 |
| Isoniazid02 | 0.796 | 0.055 |
| Rifampicin4 | 0.146 | -0.255 |
| Ethambutol3 | 0.799 | -0.274 |
| Meropenem3 | -0.454 | 0.401 |
| Vancomycin16 | 0.546 | 0.393 |
| Rv2680_day32 | -0.249 | 0.45 |
| H37Rv_KO_MarP | 0.531 | 0.285 |
| hypoxia_3wks | 0.371 | 0.482 |
| hypoxia_6wks | -0.672 | -0.027 |
| glycerol | 1.017 | -0.56 |
| cholesterol | 1.049 | 0.389 |
| AJ | -0.659 | 0.469 |
| Bibs02 | -1.417 | -0.491 |
| Bibs02c | -0.887 | 0.114 |
| BL6 | -0.627 | 0.224 |
| BL6a | -1.339 | -0.445 |
| BXD01 | -0.552 | -0.71 |
| BXD010 | -0.993 | -0.611 |
| BXD011 | -0.861 | -0.221 |
| BXD03 | -0.914 | -0.98 |
| BXD04 | -0.959 | -0.78 |
| BXD05 | -1.043 | -1.176 |
| BXD06 | -1.035 | -0.608 |
| BXD07 | -0.587 | -0.323 |
| BXD08 | -1.031 | -0.536 |
| BXD09 | -0.95 | -0.671 |
| CAST | -1.346 | -0.859 |
| CCcont | 1.503 | -0.309 |
| DS01 | 0.431 | -0.279 |
| DS02 | -0.922 | -0.061 |
| DS04 | -0.822 | -0.538 |
| DS0c | -0.11 | 0.27 |
| GP01 | -0.765 | 0.129 |
| GP02 | -0.562 | 0.045 |
| GP0c | -1.008 | 0.307 |
| NOD | -1.126 | -0.391 |
| NZO | -0.441 | 0.055 |
| PWK | -1.326 | -0.44 |
| H37Rv_KO_CtpC | -0.814 | -0.481 |
| H37Rv_KO_CtpD | -0.635 | -0.21 |
| H37Rv_KO_Rv1272 | -0.953 | -0.405 |
| H37Rv_KO_SugABC | -0.669 | 0.478 |
| H37Rv_KO_MbtN | -0.362 | 0.172 |
| Trans05 | -0.883 | 0.088 |
| macrophage_unactivated | -0.316 | 0.167 |
| IL1 | -0.955 | -0.033 |
| Rapamycin | -0.632 | -0.715 |
| Tcell | -0.671 | -0.639 |
| GMCSF | 0.0 | -0.65 |
| IFNab | -1.351 | 0.063 |
| IFNg | -0.267 | -0.489 |
| IFNg_GMCSF1 | -0.314 | 0.198 |
| Rv1432_day32 | 0.0 | -0.486 |
| Rv1565c_day32 | 1.982 | 1.537 |
| secA2_input | -0.158 | 0.564 |
| delta_Rv3594 | 0.211 | 0.93 |
| delta_Rv3717 | 0.0 | 0.927 |
| delta_Rv3811 | -0.226 | 0.617 |
| delta_Rv0954 | 0.99 | 0.618 |
| PonA1 | 1.35 | 1.25 |
| EccD1_KO | 0.0 | -0.707 |
| EspI_KO | 1.269 | 0.801 |
| PE35_KO | 0.26 | -0.898 |
| PPE68_KO | -0.202 | -0.899 |
| glycerol2 | -0.057 | -0.113 |
| lignocerate | -1.033 | -0.365 |
| oleate | -1.103 | 0.047 |
| phosphatidylcholine | -0.819 | 0.092 |
| acetate | -1.074 | -0.475 |
| glucAc | -0.734 | -0.383 |
| Rv0950ko | 0.112 | -0.425 |
| Rv1096ko | 0.112 | 1.019 |
| Rv3684ko | 0.0 | -0.501 |
| delta_otsA_trehalose | -2.509 | -1.165 |