Top 10 genes with highest correlation to Rv2419c/gpgP:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2563/- | (cc=0.531) | info on Rv2563/- |
| Rv0561c/- | (cc=0.5284) | info on Rv0561c/- |
| Rv1287/- | (cc=0.5156) | info on Rv1287/- |
| Rv2344c/dgt | (cc=0.5007) | info on Rv2344c/dgt |
| Rv1140/- | (cc=0.5) | info on Rv1140/- |
| Rv1095/phoH2 | (cc=0.4901) | info on Rv1095/phoH2 |
| Rv2258c/- | (cc=0.48) | info on Rv2258c/- |
| Rv3557c/- | (cc=0.4732) | info on Rv3557c/- |
| Rv1473/- | (cc=0.4728) | info on Rv1473/- |
| Rv3283/sseA | (cc=0.4722) | info on Rv3283/sseA |
Correlation of Rv2419c/gpgP with Rv0561c/-
Normalized LFCs for Rv2419c/gpgP:
(description and provenance of datasets)
| Rv2419c/gpgP | Rv0561c/- | |
| Fe_supp_jason_reseq | 0.538 | 2.559 |
| low_pH_jason_reseq | 0.303 | 0.0 |
| NO_jason_reseq | -0.845 | -0.995 |
| B6_jason_reseq | -0.649 | -0.421 |
| MHCII_jason_reseq | -0.437 | 0.742 |
| Isoniazid02 | 0.796 | -0.045 |
| Rifampicin4 | 0.146 | -1.887 |
| Ethambutol3 | 0.799 | -0.517 |
| Meropenem3 | -0.454 | -0.895 |
| Vancomycin16 | 0.546 | -1.021 |
| Rv2680_day32 | -0.249 | -0.554 |
| H37Rv_KO_MarP | 0.531 | -0.838 |
| hypoxia_3wks | 0.371 | -1.543 |
| hypoxia_6wks | -0.672 | -1.599 |
| glycerol | 1.017 | 2.098 |
| cholesterol | 1.049 | 1.736 |
| AJ | -0.659 | -1.531 |
| Bibs02 | -1.417 | -0.563 |
| Bibs02c | -0.887 | -0.353 |
| BL6 | -0.627 | -2.023 |
| BL6a | -1.339 | -1.148 |
| BXD01 | -0.552 | -2.107 |
| BXD010 | -0.993 | -2.072 |
| BXD011 | -0.861 | -1.711 |
| BXD03 | -0.914 | -2.187 |
| BXD04 | -0.959 | -1.877 |
| BXD05 | -1.043 | -2.042 |
| BXD06 | -1.035 | -2.159 |
| BXD07 | -0.587 | -2.101 |
| BXD08 | -1.031 | -2.151 |
| BXD09 | -0.95 | -2.273 |
| CAST | -1.346 | -2.181 |
| CCcont | 1.503 | -0.552 |
| DS01 | 0.431 | 1.685 |
| DS02 | -0.922 | -0.544 |
| DS04 | -0.822 | -0.911 |
| DS0c | -0.11 | 1.37 |
| GP01 | -0.765 | -1.409 |
| GP02 | -0.562 | -1.263 |
| GP0c | -1.008 | -2.103 |
| NOD | -1.126 | -0.903 |
| NZO | -0.441 | -2.381 |
| PWK | -1.326 | -1.137 |
| H37Rv_KO_CtpC | -0.814 | -0.941 |
| H37Rv_KO_CtpD | -0.635 | -1.603 |
| H37Rv_KO_Rv1272 | -0.953 | -0.872 |
| H37Rv_KO_SugABC | -0.669 | -1.414 |
| H37Rv_KO_MbtN | -0.362 | -1.471 |
| Trans05 | -0.883 | -1.983 |
| macrophage_unactivated | -0.316 | -0.316 |
| IL1 | -0.955 | -1.735 |
| Rapamycin | -0.632 | -1.795 |
| Tcell | -0.671 | -0.671 |
| GMCSF | 0.0 | -1.18 |
| IFNab | -1.351 | -0.623 |
| IFNg | -0.267 | -1.195 |
| IFNg_GMCSF1 | -0.314 | -0.314 |
| Rv1432_day32 | 0.0 | -0.632 |
| Rv1565c_day32 | 1.982 | 0.0 |
| secA2_input | -0.158 | 0.676 |
| delta_Rv3594 | 0.211 | -0.684 |
| delta_Rv3717 | 0.0 | -0.736 |
| delta_Rv3811 | -0.226 | -0.665 |
| delta_Rv0954 | 0.99 | 2.95 |
| PonA1 | 1.35 | 2.163 |
| EccD1_KO | 0.0 | -0.26 |
| EspI_KO | 1.269 | 0.739 |
| PE35_KO | 0.26 | 0.496 |
| PPE68_KO | -0.202 | 0.394 |
| glycerol2 | -0.057 | -1.366 |
| lignocerate | -1.033 | -0.759 |
| oleate | -1.103 | -3.187 |
| phosphatidylcholine | -0.819 | -0.036 |
| acetate | -1.074 | 1.25 |
| glucAc | -0.734 | 0.853 |
| Rv0950ko | 0.112 | -0.989 |
| Rv1096ko | 0.112 | -0.549 |
| Rv3684ko | 0.0 | -0.596 |
| delta_otsA_trehalose | -2.509 | -0.234 |