Top 10 genes with highest correlation to Rv2251/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1975/- | (cc=0.4965) | info on Rv1975/- |
| Rv0845/- | (cc=0.4534) | info on Rv0845/- |
| Rv2980/- | (cc=0.4528) | info on Rv2980/- |
| Rv0463/- | (cc=0.4489) | info on Rv0463/- |
| Rv2250A/- | (cc=0.4446) | info on Rv2250A/- |
| Rv1234/- | (cc=0.4388) | info on Rv1234/- |
| Rv3678c/- | (cc=0.4371) | info on Rv3678c/- |
| Rv2673/aftC | (cc=0.4361) | info on Rv2673/aftC |
| Rv3141/fadB4 | (cc=0.4318) | info on Rv3141/fadB4 |
| Rv3074/- | (cc=0.4239) | info on Rv3074/- |
Correlation of Rv2251/- with Rv3074/-
Normalized LFCs for Rv2251/-:
(description and provenance of datasets)
| Rv2251/- | Rv3074/- | |
| Fe_supp_jason_reseq | -1.446 | -0.12 |
| low_pH_jason_reseq | -0.477 | 0.293 |
| NO_jason_reseq | -0.953 | -0.252 |
| B6_jason_reseq | -0.158 | -0.118 |
| MHCII_jason_reseq | -2.294 | -0.113 |
| Isoniazid02 | 1.542 | 0.332 |
| Rifampicin4 | -0.406 | 1.438 |
| Ethambutol3 | 0.752 | 0.348 |
| Meropenem3 | -0.827 | 0.313 |
| Vancomycin16 | 0.053 | 0.844 |
| Rv2680_day32 | -0.41 | 0.361 |
| H37Rv_KO_MarP | -0.744 | 0.144 |
| hypoxia_3wks | -1.483 | 0.494 |
| hypoxia_6wks | -0.388 | 0.871 |
| glycerol | 0.252 | -0.704 |
| cholesterol | 0.0 | 0.01 |
| AJ | -1.106 | 0.276 |
| Bibs02 | -0.082 | -0.657 |
| Bibs02c | 0.261 | -0.483 |
| BL6 | -0.156 | -0.361 |
| BL6a | -0.606 | -0.121 |
| BXD01 | -0.058 | 0.543 |
| BXD010 | -0.118 | -0.25 |
| BXD011 | 0.192 | -0.098 |
| BXD03 | 0.498 | -0.5 |
| BXD04 | 0.742 | -0.833 |
| BXD05 | -0.522 | 0.195 |
| BXD06 | -0.307 | -0.168 |
| BXD07 | -0.084 | -0.162 |
| BXD08 | 0.039 | 0.219 |
| BXD09 | -0.67 | -0.447 |
| CAST | -0.487 | -0.234 |
| CCcont | 0.64 | 0.117 |
| DS01 | -2.678 | -1.109 |
| DS02 | -0.707 | 0.047 |
| DS04 | 0.365 | -0.396 |
| DS0c | -1.953 | 0.383 |
| GP01 | -2.023 | 0.036 |
| GP02 | -1.546 | -0.884 |
| GP0c | -2.113 | -0.413 |
| NOD | 1.438 | -0.583 |
| NZO | 0.197 | -0.302 |
| PWK | 0.166 | 0.168 |
| H37Rv_KO_CtpC | -0.286 | 0.149 |
| H37Rv_KO_CtpD | -0.76 | -0.128 |
| H37Rv_KO_Rv1272 | -0.431 | -0.226 |
| H37Rv_KO_SugABC | -1.681 | -1.711 |
| H37Rv_KO_MbtN | -0.491 | 0.074 |
| Trans05 | 0.383 | 0.668 |
| macrophage_unactivated | 0.909 | 0.814 |
| IL1 | 1.563 | -0.033 |
| Rapamycin | 2.13 | 0.62 |
| Tcell | 0.583 | 0.658 |
| GMCSF | 2.001 | -0.298 |
| IFNab | 0.187 | -0.033 |
| IFNg | 1.71 | 0.385 |
| IFNg_GMCSF1 | 1.115 | 1.348 |
| Rv1432_day32 | 0.0 | 0.166 |
| Rv1565c_day32 | -1.205 | -0.978 |
| secA2_input | 1.565 | 0.711 |
| delta_Rv3594 | -0.777 | -0.828 |
| delta_Rv3717 | -1.447 | -0.106 |
| delta_Rv3811 | -1.328 | -1.463 |
| delta_Rv0954 | 0.266 | -0.388 |
| PonA1 | -2.608 | -0.139 |
| EccD1_KO | 1.684 | 1.677 |
| EspI_KO | 1.914 | 1.095 |
| PE35_KO | 2.007 | 1.175 |
| PPE68_KO | 1.872 | 1.433 |
| glycerol2 | -1.253 | 0.398 |
| lignocerate | -0.638 | 0.558 |
| oleate | -1.44 | 0.121 |
| phosphatidylcholine | -1.057 | 0.604 |
| acetate | -1.968 | 0.02 |
| glucAc | -0.795 | 0.304 |
| Rv0950ko | 1.478 | -0.103 |
| Rv1096ko | 0.76 | 0.229 |
| Rv3684ko | 1.189 | 0.0 |
| delta_otsA_trehalose | -1.612 | -1.154 |