Top 10 genes with highest correlation to Rv2251/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1975/- | (cc=0.4965) | info on Rv1975/- |
| Rv0845/- | (cc=0.4534) | info on Rv0845/- |
| Rv2980/- | (cc=0.4528) | info on Rv2980/- |
| Rv0463/- | (cc=0.4489) | info on Rv0463/- |
| Rv2250A/- | (cc=0.4446) | info on Rv2250A/- |
| Rv1234/- | (cc=0.4388) | info on Rv1234/- |
| Rv3678c/- | (cc=0.4371) | info on Rv3678c/- |
| Rv2673/aftC | (cc=0.4361) | info on Rv2673/aftC |
| Rv3141/fadB4 | (cc=0.4318) | info on Rv3141/fadB4 |
| Rv3074/- | (cc=0.4239) | info on Rv3074/- |
Correlation of Rv2251/- with Rv1234/-
Normalized LFCs for Rv2251/-:
(description and provenance of datasets)
| Rv2251/- | Rv1234/- | |
| Fe_supp_jason_reseq | -1.446 | -0.83 |
| low_pH_jason_reseq | -0.477 | 0.085 |
| NO_jason_reseq | -0.953 | 0.425 |
| B6_jason_reseq | -0.158 | -1.557 |
| MHCII_jason_reseq | -2.294 | -1.173 |
| Isoniazid02 | 1.542 | -1.133 |
| Rifampicin4 | -0.406 | -0.615 |
| Ethambutol3 | 0.752 | 0.134 |
| Meropenem3 | -0.827 | -1.329 |
| Vancomycin16 | 0.053 | -1.143 |
| Rv2680_day32 | -0.41 | -0.117 |
| H37Rv_KO_MarP | -0.744 | 0.488 |
| hypoxia_3wks | -1.483 | -1.878 |
| hypoxia_6wks | -0.388 | -1.349 |
| glycerol | 0.252 | -0.288 |
| cholesterol | 0.0 | 1.031 |
| AJ | -1.106 | -1.98 |
| Bibs02 | -0.082 | 0.522 |
| Bibs02c | 0.261 | -2.884 |
| BL6 | -0.156 | -1.376 |
| BL6a | -0.606 | -0.926 |
| BXD01 | -0.058 | -0.15 |
| BXD010 | -0.118 | -0.726 |
| BXD011 | 0.192 | 0.433 |
| BXD03 | 0.498 | -1.746 |
| BXD04 | 0.742 | 0.22 |
| BXD05 | -0.522 | -0.017 |
| BXD06 | -0.307 | -0.843 |
| BXD07 | -0.084 | 0.969 |
| BXD08 | 0.039 | 0.196 |
| BXD09 | -0.67 | 0.083 |
| CAST | -0.487 | -0.394 |
| CCcont | 0.64 | -0.132 |
| DS01 | -2.678 | -1.769 |
| DS02 | -0.707 | -0.468 |
| DS04 | 0.365 | -1.06 |
| DS0c | -1.953 | -1.912 |
| GP01 | -2.023 | 0.79 |
| GP02 | -1.546 | -0.833 |
| GP0c | -2.113 | 0.801 |
| NOD | 1.438 | -1.796 |
| NZO | 0.197 | -0.894 |
| PWK | 0.166 | -1.729 |
| H37Rv_KO_CtpC | -0.286 | 1.033 |
| H37Rv_KO_CtpD | -0.76 | -0.949 |
| H37Rv_KO_Rv1272 | -0.431 | 0.643 |
| H37Rv_KO_SugABC | -1.681 | 1.74 |
| H37Rv_KO_MbtN | -0.491 | -0.938 |
| Trans05 | 0.383 | 1.537 |
| macrophage_unactivated | 0.909 | 0.492 |
| IL1 | 1.563 | 1.934 |
| Rapamycin | 2.13 | 1.725 |
| Tcell | 0.583 | -0.42 |
| GMCSF | 2.001 | 2.339 |
| IFNab | 0.187 | 1.097 |
| IFNg | 1.71 | 3.375 |
| IFNg_GMCSF1 | 1.115 | 2.853 |
| Rv1432_day32 | 0.0 | -2.515 |
| Rv1565c_day32 | -1.205 | -2.132 |
| secA2_input | 1.565 | 1.057 |
| delta_Rv3594 | -0.777 | 0.052 |
| delta_Rv3717 | -1.447 | 0.147 |
| delta_Rv3811 | -1.328 | -0.134 |
| delta_Rv0954 | 0.266 | 1.39 |
| PonA1 | -2.608 | 0.343 |
| EccD1_KO | 1.684 | 1.289 |
| EspI_KO | 1.914 | 1.283 |
| PE35_KO | 2.007 | 0.551 |
| PPE68_KO | 1.872 | 0.899 |
| glycerol2 | -1.253 | -1.974 |
| lignocerate | -0.638 | -1.735 |
| oleate | -1.44 | -0.332 |
| phosphatidylcholine | -1.057 | -0.98 |
| acetate | -1.968 | -1.102 |
| glucAc | -0.795 | -2.014 |
| Rv0950ko | 1.478 | 0.908 |
| Rv1096ko | 0.76 | 0.371 |
| Rv3684ko | 1.189 | 1.831 |
| delta_otsA_trehalose | -1.612 | -0.058 |