Top 10 genes with highest correlation to Rv2251/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1975/- | (cc=0.4965) | info on Rv1975/- |
| Rv0845/- | (cc=0.4534) | info on Rv0845/- |
| Rv2980/- | (cc=0.4528) | info on Rv2980/- |
| Rv0463/- | (cc=0.4489) | info on Rv0463/- |
| Rv2250A/- | (cc=0.4446) | info on Rv2250A/- |
| Rv1234/- | (cc=0.4388) | info on Rv1234/- |
| Rv3678c/- | (cc=0.4371) | info on Rv3678c/- |
| Rv2673/aftC | (cc=0.4361) | info on Rv2673/aftC |
| Rv3141/fadB4 | (cc=0.4318) | info on Rv3141/fadB4 |
| Rv3074/- | (cc=0.4239) | info on Rv3074/- |
Correlation of Rv2251/- with Rv0463/-
Normalized LFCs for Rv2251/-:
(description and provenance of datasets)
| Rv2251/- | Rv0463/- | |
| Fe_supp_jason_reseq | -1.446 | -0.008 |
| low_pH_jason_reseq | -0.477 | -0.403 |
| NO_jason_reseq | -0.953 | -0.677 |
| B6_jason_reseq | -0.158 | -1.18 |
| MHCII_jason_reseq | -2.294 | -1.029 |
| Isoniazid02 | 1.542 | 0.274 |
| Rifampicin4 | -0.406 | 0.246 |
| Ethambutol3 | 0.752 | 0.507 |
| Meropenem3 | -0.827 | 1.163 |
| Vancomycin16 | 0.053 | 0.992 |
| Rv2680_day32 | -0.41 | 0.272 |
| H37Rv_KO_MarP | -0.744 | 0.612 |
| hypoxia_3wks | -1.483 | -0.666 |
| hypoxia_6wks | -0.388 | -0.15 |
| glycerol | 0.252 | -0.413 |
| cholesterol | 0.0 | -1.723 |
| AJ | -1.106 | -1.213 |
| Bibs02 | -0.082 | 0.762 |
| Bibs02c | 0.261 | 1.006 |
| BL6 | -0.156 | 0.576 |
| BL6a | -0.606 | 0.428 |
| BXD01 | -0.058 | 0.418 |
| BXD010 | -0.118 | -0.866 |
| BXD011 | 0.192 | 0.7 |
| BXD03 | 0.498 | -0.718 |
| BXD04 | 0.742 | 0.113 |
| BXD05 | -0.522 | 0.048 |
| BXD06 | -0.307 | -0.146 |
| BXD07 | -0.084 | 0.137 |
| BXD08 | 0.039 | 0.201 |
| BXD09 | -0.67 | 0.128 |
| CAST | -0.487 | -0.022 |
| CCcont | 0.64 | 1.167 |
| DS01 | -2.678 | -0.2 |
| DS02 | -0.707 | 0.124 |
| DS04 | 0.365 | -1.698 |
| DS0c | -1.953 | -1.103 |
| GP01 | -2.023 | -1.374 |
| GP02 | -1.546 | -1.038 |
| GP0c | -2.113 | -0.652 |
| NOD | 1.438 | -1.077 |
| NZO | 0.197 | 0.416 |
| PWK | 0.166 | -0.091 |
| H37Rv_KO_CtpC | -0.286 | 0.014 |
| H37Rv_KO_CtpD | -0.76 | -0.982 |
| H37Rv_KO_Rv1272 | -0.431 | -0.169 |
| H37Rv_KO_SugABC | -1.681 | -1.953 |
| H37Rv_KO_MbtN | -0.491 | -0.343 |
| Trans05 | 0.383 | 1.108 |
| macrophage_unactivated | 0.909 | 0.565 |
| IL1 | 1.563 | 1.026 |
| Rapamycin | 2.13 | 0.654 |
| Tcell | 0.583 | 1.144 |
| GMCSF | 2.001 | 1.141 |
| IFNab | 0.187 | 1.022 |
| IFNg | 1.71 | 1.053 |
| IFNg_GMCSF1 | 1.115 | 0.305 |
| Rv1432_day32 | 0.0 | -0.43 |
| Rv1565c_day32 | -1.205 | -0.144 |
| secA2_input | 1.565 | -0.601 |
| delta_Rv3594 | -0.777 | -1.196 |
| delta_Rv3717 | -1.447 | -1.763 |
| delta_Rv3811 | -1.328 | -0.971 |
| delta_Rv0954 | 0.266 | -0.994 |
| PonA1 | -2.608 | -1.825 |
| EccD1_KO | 1.684 | -0.335 |
| EspI_KO | 1.914 | 0.927 |
| PE35_KO | 2.007 | 0.808 |
| PPE68_KO | 1.872 | 0.064 |
| glycerol2 | -1.253 | 0.977 |
| lignocerate | -0.638 | 0.718 |
| oleate | -1.44 | 0.217 |
| phosphatidylcholine | -1.057 | 0.462 |
| acetate | -1.968 | 0.903 |
| glucAc | -0.795 | 0.123 |
| Rv0950ko | 1.478 | 1.309 |
| Rv1096ko | 0.76 | 0.214 |
| Rv3684ko | 1.189 | -0.449 |
| delta_otsA_trehalose | -1.612 | -1.296 |