Top 10 genes with highest correlation to Rv2251/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1975/- | (cc=0.4965) | info on Rv1975/- |
| Rv0845/- | (cc=0.4534) | info on Rv0845/- |
| Rv2980/- | (cc=0.4528) | info on Rv2980/- |
| Rv0463/- | (cc=0.4489) | info on Rv0463/- |
| Rv2250A/- | (cc=0.4446) | info on Rv2250A/- |
| Rv1234/- | (cc=0.4388) | info on Rv1234/- |
| Rv3678c/- | (cc=0.4371) | info on Rv3678c/- |
| Rv2673/aftC | (cc=0.4361) | info on Rv2673/aftC |
| Rv3141/fadB4 | (cc=0.4318) | info on Rv3141/fadB4 |
| Rv3074/- | (cc=0.4239) | info on Rv3074/- |
Correlation of Rv2251/- with Rv1975/-
Normalized LFCs for Rv2251/-:
(description and provenance of datasets)
| Rv2251/- | Rv1975/- | |
| Fe_supp_jason_reseq | -1.446 | -0.128 |
| low_pH_jason_reseq | -0.477 | -0.473 |
| NO_jason_reseq | -0.953 | 0.517 |
| B6_jason_reseq | -0.158 | 0.133 |
| MHCII_jason_reseq | -2.294 | 0.415 |
| Isoniazid02 | 1.542 | 0.096 |
| Rifampicin4 | -0.406 | 0.089 |
| Ethambutol3 | 0.752 | 1.943 |
| Meropenem3 | -0.827 | 0.381 |
| Vancomycin16 | 0.053 | 0.257 |
| Rv2680_day32 | -0.41 | 0.284 |
| H37Rv_KO_MarP | -0.744 | 0.117 |
| hypoxia_3wks | -1.483 | 0.279 |
| hypoxia_6wks | -0.388 | 0.363 |
| glycerol | 0.252 | 1.173 |
| cholesterol | 0.0 | 0.434 |
| AJ | -1.106 | -0.366 |
| Bibs02 | -0.082 | 0.417 |
| Bibs02c | 0.261 | -0.32 |
| BL6 | -0.156 | -0.777 |
| BL6a | -0.606 | -0.601 |
| BXD01 | -0.058 | -0.199 |
| BXD010 | -0.118 | 0.253 |
| BXD011 | 0.192 | -0.238 |
| BXD03 | 0.498 | -0.294 |
| BXD04 | 0.742 | -0.148 |
| BXD05 | -0.522 | 0.103 |
| BXD06 | -0.307 | 0.049 |
| BXD07 | -0.084 | 0.132 |
| BXD08 | 0.039 | 0.211 |
| BXD09 | -0.67 | -0.091 |
| CAST | -0.487 | -0.397 |
| CCcont | 0.64 | -0.387 |
| DS01 | -2.678 | 0.375 |
| DS02 | -0.707 | -0.312 |
| DS04 | 0.365 | -0.16 |
| DS0c | -1.953 | 0.321 |
| GP01 | -2.023 | 0.376 |
| GP02 | -1.546 | 0.865 |
| GP0c | -2.113 | 0.257 |
| NOD | 1.438 | 0.932 |
| NZO | 0.197 | -0.475 |
| PWK | 0.166 | -0.101 |
| H37Rv_KO_CtpC | -0.286 | -0.02 |
| H37Rv_KO_CtpD | -0.76 | -0.384 |
| H37Rv_KO_Rv1272 | -0.431 | -0.542 |
| H37Rv_KO_SugABC | -1.681 | -0.488 |
| H37Rv_KO_MbtN | -0.491 | -0.137 |
| Trans05 | 0.383 | 0.064 |
| macrophage_unactivated | 0.909 | 0.492 |
| IL1 | 1.563 | 0.495 |
| Rapamycin | 2.13 | 0.829 |
| Tcell | 0.583 | -0.189 |
| GMCSF | 2.001 | 0.602 |
| IFNab | 0.187 | 0.242 |
| IFNg | 1.71 | 0.927 |
| IFNg_GMCSF1 | 1.115 | 1.059 |
| Rv1432_day32 | 0.0 | -0.035 |
| Rv1565c_day32 | -1.205 | -1.362 |
| secA2_input | 1.565 | 0.142 |
| delta_Rv3594 | -0.777 | -0.652 |
| delta_Rv3717 | -1.447 | -0.482 |
| delta_Rv3811 | -1.328 | -0.623 |
| delta_Rv0954 | 0.266 | -0.39 |
| PonA1 | -2.608 | -0.559 |
| EccD1_KO | 1.684 | 0.483 |
| EspI_KO | 1.914 | 1.027 |
| PE35_KO | 2.007 | 0.907 |
| PPE68_KO | 1.872 | 0.976 |
| glycerol2 | -1.253 | -0.597 |
| lignocerate | -0.638 | -0.597 |
| oleate | -1.44 | 0.027 |
| phosphatidylcholine | -1.057 | -0.436 |
| acetate | -1.968 | -1.092 |
| glucAc | -0.795 | -0.891 |
| Rv0950ko | 1.478 | 0.775 |
| Rv1096ko | 0.76 | 0.452 |
| Rv3684ko | 1.189 | 0.956 |
| delta_otsA_trehalose | -1.612 | -0.873 |