Top 10 genes with highest correlation to Rv2138/lppL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1641/infC | (cc=0.5572) | info on Rv1641/infC |
| Rv3618/- | (cc=0.4467) | info on Rv3618/- |
| Rv0375c/- | (cc=0.4467) | info on Rv0375c/- |
| Rv3614c/espD | (cc=0.4379) | info on Rv3614c/espD |
| Rv3362c/- | (cc=0.4376) | info on Rv3362c/- |
| Rv0857/- | (cc=0.4321) | info on Rv0857/- |
| Rv3616c/espA | (cc=0.4306) | info on Rv3616c/espA |
| Rv1323/fadA4 | (cc=0.4266) | info on Rv1323/fadA4 |
| Rv2725c/hflX | (cc=0.4264) | info on Rv2725c/hflX |
| Rv0601c/- | (cc=0.4225) | info on Rv0601c/- |
Correlation of Rv2138/lppL with Rv3614c/espD
Normalized LFCs for Rv2138/lppL:
(description and provenance of datasets)
| Rv2138/lppL | Rv3614c/espD | |
| Fe_supp_jason_reseq | 1.339 | -0.587 |
| low_pH_jason_reseq | 0.0 | -0.668 |
| NO_jason_reseq | 0.0 | -0.795 |
| B6_jason_reseq | 0.421 | -2.337 |
| MHCII_jason_reseq | 0.829 | -2.243 |
| Isoniazid02 | 0.987 | 0.007 |
| Rifampicin4 | -0.271 | -0.187 |
| Ethambutol3 | 0.113 | 0.499 |
| Meropenem3 | -0.12 | 0.052 |
| Vancomycin16 | 0.0 | 0.013 |
| Rv2680_day32 | -0.366 | -1.55 |
| H37Rv_KO_MarP | -0.116 | 1.281 |
| hypoxia_3wks | 0.459 | -0.159 |
| hypoxia_6wks | 0.0 | -1.084 |
| glycerol | -0.518 | -1.3 |
| cholesterol | -0.067 | -0.729 |
| AJ | 0.103 | -5.192 |
| Bibs02 | -0.948 | -5.457 |
| Bibs02c | -1.423 | -4.547 |
| BL6 | -0.746 | -1.299 |
| BL6a | -1.027 | -4.873 |
| BXD01 | -1.134 | -2.886 |
| BXD010 | -0.987 | -2.241 |
| BXD011 | -0.661 | -2.548 |
| BXD03 | -0.92 | -2.31 |
| BXD04 | -0.953 | -2.767 |
| BXD05 | 0.059 | -1.613 |
| BXD06 | -0.796 | -2.794 |
| BXD07 | -0.619 | -2.523 |
| BXD08 | -1.025 | -3.347 |
| BXD09 | -0.729 | -3.276 |
| CAST | -0.219 | -3.997 |
| CCcont | -0.89 | -0.378 |
| DS01 | -0.606 | -6.0 |
| DS02 | -0.972 | -6.0 |
| DS04 | -1.689 | -3.847 |
| DS0c | -1.889 | -5.276 |
| GP01 | -0.86 | -1.875 |
| GP02 | -0.724 | -2.344 |
| GP0c | -1.132 | -1.179 |
| NOD | 3.838 | 0.153 |
| NZO | -1.357 | -6.0 |
| PWK | 0.676 | -4.825 |
| H37Rv_KO_CtpC | -0.617 | -1.587 |
| H37Rv_KO_CtpD | -1.103 | -1.102 |
| H37Rv_KO_Rv1272 | -0.959 | -1.097 |
| H37Rv_KO_SugABC | -0.863 | -2.464 |
| H37Rv_KO_MbtN | -0.897 | 0.817 |
| Trans05 | -1.138 | -0.72 |
| macrophage_unactivated | 0.0 | -0.218 |
| IL1 | 0.297 | -0.148 |
| Rapamycin | 1.353 | -0.672 |
| Tcell | -0.349 | -1.235 |
| GMCSF | 0.739 | 0.016 |
| IFNab | 0.0 | 1.128 |
| IFNg | -0.286 | -1.098 |
| IFNg_GMCSF1 | 0.0 | 0.682 |
| Rv1432_day32 | 0.0 | -1.13 |
| Rv1565c_day32 | -0.19 | -3.097 |
| secA2_input | -0.085 | -0.873 |
| delta_Rv3594 | 0.277 | 0.242 |
| delta_Rv3717 | 0.522 | -0.596 |
| delta_Rv3811 | -0.306 | -0.433 |
| delta_Rv0954 | -0.266 | -0.437 |
| PonA1 | -0.372 | -1.641 |
| EccD1_KO | 0.0 | 0.572 |
| EspI_KO | -0.588 | 1.514 |
| PE35_KO | -0.601 | 1.082 |
| PPE68_KO | 0.298 | 1.222 |
| glycerol2 | 0.0 | 1.184 |
| lignocerate | 0.0 | 0.6 |
| oleate | 0.0 | 1.136 |
| phosphatidylcholine | 0.0 | 0.262 |
| acetate | 0.229 | -0.153 |
| glucAc | 0.272 | -0.228 |
| Rv0950ko | 0.302 | 0.485 |
| Rv1096ko | 0.302 | -0.6 |
| Rv3684ko | 0.0 | -0.766 |
| delta_otsA_trehalose | -0.122 | 0.89 |