Top 10 genes with highest correlation to Rv2138/lppL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1641/infC | (cc=0.5572) | info on Rv1641/infC |
| Rv3618/- | (cc=0.4467) | info on Rv3618/- |
| Rv0375c/- | (cc=0.4467) | info on Rv0375c/- |
| Rv3614c/espD | (cc=0.4379) | info on Rv3614c/espD |
| Rv3362c/- | (cc=0.4376) | info on Rv3362c/- |
| Rv0857/- | (cc=0.4321) | info on Rv0857/- |
| Rv3616c/espA | (cc=0.4306) | info on Rv3616c/espA |
| Rv1323/fadA4 | (cc=0.4266) | info on Rv1323/fadA4 |
| Rv2725c/hflX | (cc=0.4264) | info on Rv2725c/hflX |
| Rv0601c/- | (cc=0.4225) | info on Rv0601c/- |
Correlation of Rv2138/lppL with Rv0601c/-
Normalized LFCs for Rv2138/lppL:
(description and provenance of datasets)
| Rv2138/lppL | Rv0601c/- | |
| Fe_supp_jason_reseq | 1.339 | 1.601 |
| low_pH_jason_reseq | 0.0 | 0.898 |
| NO_jason_reseq | 0.0 | 2.024 |
| B6_jason_reseq | 0.421 | 2.532 |
| MHCII_jason_reseq | 0.829 | 1.891 |
| Isoniazid02 | 0.987 | 1.088 |
| Rifampicin4 | -0.271 | 0.777 |
| Ethambutol3 | 0.113 | -0.185 |
| Meropenem3 | -0.12 | 0.068 |
| Vancomycin16 | 0.0 | 1.395 |
| Rv2680_day32 | -0.366 | 1.998 |
| H37Rv_KO_MarP | -0.116 | 0.718 |
| hypoxia_3wks | 0.459 | -0.06 |
| hypoxia_6wks | 0.0 | 1.222 |
| glycerol | -0.518 | 0.456 |
| cholesterol | -0.067 | 0.256 |
| AJ | 0.103 | -0.351 |
| Bibs02 | -0.948 | 0.368 |
| Bibs02c | -1.423 | 1.217 |
| BL6 | -0.746 | -2.428 |
| BL6a | -1.027 | 0.835 |
| BXD01 | -1.134 | -1.118 |
| BXD010 | -0.987 | -0.776 |
| BXD011 | -0.661 | -0.583 |
| BXD03 | -0.92 | -0.95 |
| BXD04 | -0.953 | -0.816 |
| BXD05 | 0.059 | 0.0 |
| BXD06 | -0.796 | -0.081 |
| BXD07 | -0.619 | -0.557 |
| BXD08 | -1.025 | -1.717 |
| BXD09 | -0.729 | -0.086 |
| CAST | -0.219 | 0.641 |
| CCcont | -0.89 | -0.617 |
| DS01 | -0.606 | 0.548 |
| DS02 | -0.972 | 0.126 |
| DS04 | -1.689 | 2.599 |
| DS0c | -1.889 | 0.314 |
| GP01 | -0.86 | -1.827 |
| GP02 | -0.724 | -2.143 |
| GP0c | -1.132 | -1.094 |
| NOD | 3.838 | 2.018 |
| NZO | -1.357 | -0.737 |
| PWK | 0.676 | -0.789 |
| H37Rv_KO_CtpC | -0.617 | -1.118 |
| H37Rv_KO_CtpD | -1.103 | -2.459 |
| H37Rv_KO_Rv1272 | -0.959 | -2.492 |
| H37Rv_KO_SugABC | -0.863 | -1.877 |
| H37Rv_KO_MbtN | -0.897 | -2.414 |
| Trans05 | -1.138 | -0.111 |
| macrophage_unactivated | 0.0 | 2.541 |
| IL1 | 0.297 | 1.373 |
| Rapamycin | 1.353 | 1.921 |
| Tcell | -0.349 | 0.31 |
| GMCSF | 0.739 | 0.644 |
| IFNab | 0.0 | 0.774 |
| IFNg | -0.286 | 0.425 |
| IFNg_GMCSF1 | 0.0 | 2.555 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -0.19 | -1.267 |
| secA2_input | -0.085 | 0.543 |
| delta_Rv3594 | 0.277 | -0.802 |
| delta_Rv3717 | 0.522 | 0.274 |
| delta_Rv3811 | -0.306 | 0.726 |
| delta_Rv0954 | -0.266 | 0.098 |
| PonA1 | -0.372 | 0.792 |
| EccD1_KO | 0.0 | 0.97 |
| EspI_KO | -0.588 | 0.183 |
| PE35_KO | -0.601 | -1.843 |
| PPE68_KO | 0.298 | -0.534 |
| glycerol2 | 0.0 | -0.581 |
| lignocerate | 0.0 | 0.751 |
| oleate | 0.0 | -2.579 |
| phosphatidylcholine | 0.0 | 0.161 |
| acetate | 0.229 | 1.077 |
| glucAc | 0.272 | 0.806 |
| Rv0950ko | 0.302 | 0.175 |
| Rv1096ko | 0.302 | 0.657 |
| Rv3684ko | 0.0 | -0.298 |
| delta_otsA_trehalose | -0.122 | 0.084 |