Top 10 genes with highest correlation to Rv2138/lppL:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1641/infC | (cc=0.5572) | info on Rv1641/infC |
| Rv3618/- | (cc=0.4467) | info on Rv3618/- |
| Rv0375c/- | (cc=0.4467) | info on Rv0375c/- |
| Rv3614c/espD | (cc=0.4379) | info on Rv3614c/espD |
| Rv3362c/- | (cc=0.4376) | info on Rv3362c/- |
| Rv0857/- | (cc=0.4321) | info on Rv0857/- |
| Rv3616c/espA | (cc=0.4306) | info on Rv3616c/espA |
| Rv1323/fadA4 | (cc=0.4266) | info on Rv1323/fadA4 |
| Rv2725c/hflX | (cc=0.4264) | info on Rv2725c/hflX |
| Rv0601c/- | (cc=0.4225) | info on Rv0601c/- |
Correlation of Rv2138/lppL with Rv1641/infC
Normalized LFCs for Rv2138/lppL:
(description and provenance of datasets)
| Rv2138/lppL | Rv1641/infC | |
| Fe_supp_jason_reseq | 1.339 | 0.0 |
| low_pH_jason_reseq | 0.0 | 0.0 |
| NO_jason_reseq | 0.0 | 0.0 |
| B6_jason_reseq | 0.421 | 0.0 |
| MHCII_jason_reseq | 0.829 | 0.0 |
| Isoniazid02 | 0.987 | 0.0 |
| Rifampicin4 | -0.271 | 0.0 |
| Ethambutol3 | 0.113 | 0.0 |
| Meropenem3 | -0.12 | 0.165 |
| Vancomycin16 | 0.0 | 0.366 |
| Rv2680_day32 | -0.366 | 0.0 |
| H37Rv_KO_MarP | -0.116 | 0.0 |
| hypoxia_3wks | 0.459 | 0.0 |
| hypoxia_6wks | 0.0 | 0.0 |
| glycerol | -0.518 | -0.554 |
| cholesterol | -0.067 | -0.398 |
| AJ | 0.103 | 0.788 |
| Bibs02 | -0.948 | -0.502 |
| Bibs02c | -1.423 | -0.574 |
| BL6 | -0.746 | -0.343 |
| BL6a | -1.027 | -0.544 |
| BXD01 | -1.134 | -0.358 |
| BXD010 | -0.987 | -0.352 |
| BXD011 | -0.661 | -0.35 |
| BXD03 | -0.92 | -0.371 |
| BXD04 | -0.953 | -0.34 |
| BXD05 | 0.059 | -0.369 |
| BXD06 | -0.796 | -0.366 |
| BXD07 | -0.619 | -0.38 |
| BXD08 | -1.025 | -0.365 |
| BXD09 | -0.729 | -0.386 |
| CAST | -0.219 | 0.0 |
| CCcont | -0.89 | -0.41 |
| DS01 | -0.606 | -0.648 |
| DS02 | -0.972 | -0.597 |
| DS04 | -1.689 | -0.533 |
| DS0c | -1.889 | -0.596 |
| GP01 | -0.86 | -0.271 |
| GP02 | -0.724 | -0.228 |
| GP0c | -1.132 | -0.357 |
| NOD | 3.838 | 1.235 |
| NZO | -1.357 | 0.559 |
| PWK | 0.676 | 0.152 |
| H37Rv_KO_CtpC | -0.617 | -0.446 |
| H37Rv_KO_CtpD | -1.103 | -0.348 |
| H37Rv_KO_Rv1272 | -0.959 | -0.387 |
| H37Rv_KO_SugABC | -0.863 | -0.272 |
| H37Rv_KO_MbtN | -0.897 | -0.283 |
| Trans05 | -1.138 | -0.359 |
| macrophage_unactivated | 0.0 | 0.0 |
| IL1 | 0.297 | 0.0 |
| Rapamycin | 1.353 | 0.0 |
| Tcell | -0.349 | 0.0 |
| GMCSF | 0.739 | 0.0 |
| IFNab | 0.0 | 0.0 |
| IFNg | -0.286 | 0.0 |
| IFNg_GMCSF1 | 0.0 | 0.0 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | -0.19 | 0.0 |
| secA2_input | -0.085 | 0.377 |
| delta_Rv3594 | 0.277 | 0.0 |
| delta_Rv3717 | 0.522 | 0.0 |
| delta_Rv3811 | -0.306 | 0.0 |
| delta_Rv0954 | -0.266 | 0.0 |
| PonA1 | -0.372 | 0.437 |
| EccD1_KO | 0.0 | -0.793 |
| EspI_KO | -0.588 | -1.081 |
| PE35_KO | -0.601 | -1.105 |
| PPE68_KO | 0.298 | -1.213 |
| glycerol2 | 0.0 | 0.0 |
| lignocerate | 0.0 | 0.0 |
| oleate | 0.0 | 0.0 |
| phosphatidylcholine | 0.0 | 0.0 |
| acetate | 0.229 | 0.0 |
| glucAc | 0.272 | 0.272 |
| Rv0950ko | 0.302 | 0.0 |
| Rv1096ko | 0.302 | 0.416 |
| Rv3684ko | 0.0 | 0.861 |
| delta_otsA_trehalose | -0.122 | 0.254 |