Top 10 genes with highest correlation to Rv2135c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2904c/rplS | (cc=0.6217) | info on Rv2904c/rplS |
| Rv2051c/ppm1 | (cc=0.558) | info on Rv2051c/ppm1 |
| Rv0736/rslA | (cc=0.5513) | info on Rv0736/rslA |
| Rv2869c/rip | (cc=0.5271) | info on Rv2869c/rip |
| Rv2603c/- | (cc=0.4946) | info on Rv2603c/- |
| Rv0410c/pknG | (cc=0.4935) | info on Rv0410c/pknG |
| Rv0324/- | (cc=0.4924) | info on Rv0324/- |
| Rv3715c/recR | (cc=0.4668) | info on Rv3715c/recR |
| Rv3245c/mtrB | (cc=0.466) | info on Rv3245c/mtrB |
| Rv2241/aceE | (cc=0.4644) | info on Rv2241/aceE |
Correlation of Rv2135c/- with Rv3715c/recR
Normalized LFCs for Rv2135c/-:
(description and provenance of datasets)
| Rv2135c/- | Rv3715c/recR | |
| Fe_supp_jason_reseq | 2.559 | 2.883 |
| low_pH_jason_reseq | -0.634 | 0.0 |
| NO_jason_reseq | -0.995 | -1.993 |
| B6_jason_reseq | -0.421 | -0.413 |
| MHCII_jason_reseq | -0.37 | -0.283 |
| Isoniazid02 | -2.187 | 0.987 |
| Rifampicin4 | -0.49 | -0.357 |
| Ethambutol3 | 2.38 | 0.574 |
| Meropenem3 | -0.399 | 0.223 |
| Vancomycin16 | 0.424 | -0.976 |
| Rv2680_day32 | 0.0 | -0.642 |
| H37Rv_KO_MarP | -3.718 | -1.411 |
| hypoxia_3wks | -1.511 | -0.522 |
| hypoxia_6wks | -0.791 | -0.576 |
| glycerol | 1.758 | 1.537 |
| cholesterol | 0.0 | 0.463 |
| AJ | 0.0 | 0.324 |
| Bibs02 | 0.0 | 0.371 |
| Bibs02c | 0.0 | -0.527 |
| BL6 | 0.0 | 0.649 |
| BL6a | 0.0 | 0.0 |
| BXD01 | 0.0 | 0.79 |
| BXD010 | 0.0 | 0.722 |
| BXD011 | 0.0 | 0.0 |
| BXD03 | 0.0 | 1.448 |
| BXD04 | 0.0 | 0.395 |
| BXD05 | 0.0 | 0.502 |
| BXD06 | 0.0 | 0.566 |
| BXD07 | 0.0 | 1.445 |
| BXD08 | 0.0 | 1.351 |
| BXD09 | 0.0 | 0.285 |
| CAST | 0.0 | -0.809 |
| CCcont | 2.382 | 2.556 |
| DS01 | 0.0 | 0.171 |
| DS02 | 0.0 | -0.764 |
| DS04 | 0.0 | 0.394 |
| DS0c | 0.0 | 0.157 |
| GP01 | 0.0 | 1.484 |
| GP02 | 0.0 | 0.06 |
| GP0c | 0.0 | 0.893 |
| NOD | 0.0 | -0.566 |
| NZO | 0.0 | 1.124 |
| PWK | 0.0 | -0.494 |
| H37Rv_KO_CtpC | 0.0 | 2.019 |
| H37Rv_KO_CtpD | 0.0 | 0.537 |
| H37Rv_KO_Rv1272 | 0.0 | -0.495 |
| H37Rv_KO_SugABC | 0.099 | 1.605 |
| H37Rv_KO_MbtN | 0.196 | 0.487 |
| Trans05 | 0.0 | 0.344 |
| macrophage_unactivated | -0.761 | 0.669 |
| IL1 | -1.124 | -1.011 |
| Rapamycin | -1.163 | -0.491 |
| Tcell | -1.235 | 1.098 |
| GMCSF | -1.001 | -1.444 |
| IFNab | 0.0 | -0.236 |
| IFNg | -1.013 | -0.911 |
| IFNg_GMCSF1 | -1.191 | -0.779 |
| Rv1432_day32 | 0.0 | 0.0 |
| Rv1565c_day32 | 0.0 | -0.766 |
| secA2_input | 4.169 | 0.994 |
| delta_Rv3594 | -1.158 | 0.961 |
| delta_Rv3717 | -2.555 | 0.257 |
| delta_Rv3811 | -2.149 | 0.934 |
| delta_Rv0954 | 1.49 | 1.145 |
| PonA1 | 2.001 | 0.145 |
| EccD1_KO | -2.375 | -1.786 |
| EspI_KO | -2.059 | -2.772 |
| PE35_KO | 0.067 | -0.817 |
| PPE68_KO | 0.889 | -1.805 |
| glycerol2 | -0.82 | -2.434 |
| lignocerate | -1.033 | -2.02 |
| oleate | -1.202 | -1.961 |
| phosphatidylcholine | -1.188 | -2.027 |
| acetate | 0.69 | -0.166 |
| glucAc | 0.229 | 0.605 |
| Rv0950ko | 1.658 | -0.926 |
| Rv1096ko | 0.344 | 0.507 |
| Rv3684ko | 1.346 | 1.094 |
| delta_otsA_trehalose | 1.021 | 0.83 |