Top 10 genes with highest correlation to Rv2135c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2904c/rplS | (cc=0.6217) | info on Rv2904c/rplS |
| Rv2051c/ppm1 | (cc=0.558) | info on Rv2051c/ppm1 |
| Rv0736/rslA | (cc=0.5513) | info on Rv0736/rslA |
| Rv2869c/rip | (cc=0.5271) | info on Rv2869c/rip |
| Rv2603c/- | (cc=0.4946) | info on Rv2603c/- |
| Rv0410c/pknG | (cc=0.4935) | info on Rv0410c/pknG |
| Rv0324/- | (cc=0.4924) | info on Rv0324/- |
| Rv3715c/recR | (cc=0.4668) | info on Rv3715c/recR |
| Rv3245c/mtrB | (cc=0.466) | info on Rv3245c/mtrB |
| Rv2241/aceE | (cc=0.4644) | info on Rv2241/aceE |
Correlation of Rv2135c/- with Rv2241/aceE
Normalized LFCs for Rv2135c/-:
(description and provenance of datasets)
| Rv2135c/- | Rv2241/aceE | |
| Fe_supp_jason_reseq | 2.559 | 3.471 |
| low_pH_jason_reseq | -0.634 | -0.848 |
| NO_jason_reseq | -0.995 | 3.555 |
| B6_jason_reseq | -0.421 | -1.298 |
| MHCII_jason_reseq | -0.37 | -0.926 |
| Isoniazid02 | -2.187 | -1.198 |
| Rifampicin4 | -0.49 | 1.037 |
| Ethambutol3 | 2.38 | -0.336 |
| Meropenem3 | -0.399 | -0.858 |
| Vancomycin16 | 0.424 | -1.157 |
| Rv2680_day32 | 0.0 | -0.359 |
| H37Rv_KO_MarP | -3.718 | -1.983 |
| hypoxia_3wks | -1.511 | -1.284 |
| hypoxia_6wks | -0.791 | -1.222 |
| glycerol | 1.758 | -0.554 |
| cholesterol | 0.0 | -0.398 |
| AJ | 0.0 | -0.405 |
| Bibs02 | 0.0 | -0.152 |
| Bibs02c | 0.0 | -0.574 |
| BL6 | 0.0 | 0.0 |
| BL6a | 0.0 | -0.165 |
| BXD01 | 0.0 | -0.109 |
| BXD010 | 0.0 | -0.352 |
| BXD011 | 0.0 | 0.099 |
| BXD03 | 0.0 | 1.032 |
| BXD04 | 0.0 | 0.347 |
| BXD05 | 0.0 | 0.377 |
| BXD06 | 0.0 | 0.796 |
| BXD07 | 0.0 | -0.115 |
| BXD08 | 0.0 | 0.0 |
| BXD09 | 0.0 | 0.109 |
| CAST | 0.0 | -0.192 |
| CCcont | 2.382 | 2.006 |
| DS01 | 0.0 | -0.648 |
| DS02 | 0.0 | -0.597 |
| DS04 | 0.0 | 0.0 |
| DS0c | 0.0 | -0.596 |
| GP01 | 0.0 | -0.271 |
| GP02 | 0.0 | -0.228 |
| GP0c | 0.0 | -0.227 |
| NOD | 0.0 | 0.174 |
| NZO | 0.0 | -0.166 |
| PWK | 0.0 | 1.34 |
| H37Rv_KO_CtpC | 0.0 | -0.135 |
| H37Rv_KO_CtpD | 0.0 | 0.189 |
| H37Rv_KO_Rv1272 | 0.0 | 0.0 |
| H37Rv_KO_SugABC | 0.099 | 0.591 |
| H37Rv_KO_MbtN | 0.196 | 1.313 |
| Trans05 | 0.0 | -0.109 |
| macrophage_unactivated | -0.761 | -1.016 |
| IL1 | -1.124 | -1.326 |
| Rapamycin | -1.163 | -1.795 |
| Tcell | -1.235 | -0.671 |
| GMCSF | -1.001 | -1.18 |
| IFNab | 0.0 | 0.281 |
| IFNg | -1.013 | -0.861 |
| IFNg_GMCSF1 | -1.191 | -1.405 |
| Rv1432_day32 | 0.0 | -0.884 |
| Rv1565c_day32 | 0.0 | 0.0 |
| secA2_input | 4.169 | 0.82 |
| delta_Rv3594 | -1.158 | 0.156 |
| delta_Rv3717 | -2.555 | 0.074 |
| delta_Rv3811 | -2.149 | -0.473 |
| delta_Rv0954 | 1.49 | -0.786 |
| PonA1 | 2.001 | 1.419 |
| EccD1_KO | -2.375 | -1.246 |
| EspI_KO | -2.059 | -1.218 |
| PE35_KO | 0.067 | -0.335 |
| PPE68_KO | 0.889 | -0.118 |
| glycerol2 | -0.82 | -0.193 |
| lignocerate | -1.033 | -0.168 |
| oleate | -1.202 | -0.196 |
| phosphatidylcholine | -1.188 | -0.193 |
| acetate | 0.69 | -0.229 |
| glucAc | 0.229 | 0.0 |
| Rv0950ko | 1.658 | 0.045 |
| Rv1096ko | 0.344 | 0.0 |
| Rv3684ko | 1.346 | 0.282 |
| delta_otsA_trehalose | 1.021 | -1.139 |