Top 10 genes with highest correlation to Rv2091c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2672/- | (cc=0.6824) | info on Rv2672/- |
| Rv1823/- | (cc=0.6767) | info on Rv1823/- |
| Rv3869/eccB1 | (cc=0.6614) | info on Rv3869/eccB1 |
| Rv1824/- | (cc=0.6601) | info on Rv1824/- |
| Rv3197/- | (cc=0.6526) | info on Rv3197/- |
| Rv2467/pepN | (cc=0.6447) | info on Rv2467/pepN |
| Rv2140c/TB18.6 | (cc=0.6447) | info on Rv2140c/TB18.6 |
| Rv3616c/espA | (cc=0.642) | info on Rv3616c/espA |
| Rv3870/eccCa1 | (cc=0.6415) | info on Rv3870/eccCa1 |
| Rv1825/- | (cc=0.6289) | info on Rv1825/- |
Correlation of Rv2091c/- with Rv3616c/espA
Normalized LFCs for Rv2091c/-:
(description and provenance of datasets)
| Rv2091c/- | Rv3616c/espA | |
| Fe_supp_jason_reseq | 1.432 | 0.087 |
| low_pH_jason_reseq | -0.796 | -0.775 |
| NO_jason_reseq | -2.625 | -1.278 |
| B6_jason_reseq | -1.862 | -3.09 |
| MHCII_jason_reseq | -0.892 | -2.722 |
| Isoniazid02 | -0.109 | 0.476 |
| Rifampicin4 | -3.106 | 0.241 |
| Ethambutol3 | 0.674 | -0.018 |
| Meropenem3 | 2.1 | 0.789 |
| Vancomycin16 | -0.409 | -0.18 |
| Rv2680_day32 | -2.156 | -1.717 |
| H37Rv_KO_MarP | 5.856 | 0.381 |
| hypoxia_3wks | -2.373 | 0.024 |
| hypoxia_6wks | -3.817 | -0.098 |
| glycerol | 0.05 | -1.435 |
| cholesterol | -0.929 | -1.373 |
| AJ | -2.266 | -4.551 |
| Bibs02 | -2.134 | -4.346 |
| Bibs02c | -1.734 | -4.142 |
| BL6 | -3.158 | -3.453 |
| BL6a | -2.274 | -4.605 |
| BXD01 | -3.592 | -3.648 |
| BXD010 | -3.425 | -2.883 |
| BXD011 | -2.647 | -2.961 |
| BXD03 | -3.323 | -3.143 |
| BXD04 | -3.41 | -3.155 |
| BXD05 | -2.993 | -2.17 |
| BXD06 | -3.57 | -3.908 |
| BXD07 | -3.232 | -3.771 |
| BXD08 | -3.268 | -3.672 |
| BXD09 | -3.548 | -4.181 |
| CAST | -4.228 | -5.474 |
| CCcont | -0.365 | -1.136 |
| DS01 | -3.251 | -6.0 |
| DS02 | -1.344 | -5.764 |
| DS04 | -3.123 | -3.671 |
| DS0c | -4.062 | -5.466 |
| GP01 | -2.813 | -3.404 |
| GP02 | -2.453 | -2.752 |
| GP0c | -3.282 | -1.597 |
| NOD | -0.675 | -1.995 |
| NZO | -3.661 | -5.358 |
| PWK | -4.362 | -5.836 |
| H37Rv_KO_CtpC | -0.397 | -2.684 |
| H37Rv_KO_CtpD | -2.003 | -2.791 |
| H37Rv_KO_Rv1272 | -2.399 | -1.864 |
| H37Rv_KO_SugABC | -1.783 | -1.092 |
| H37Rv_KO_MbtN | -1.127 | 0.118 |
| Trans05 | -3.128 | -1.933 |
| macrophage_unactivated | -0.066 | -0.079 |
| IL1 | 0.184 | 1.35 |
| Rapamycin | 0.433 | -0.037 |
| Tcell | -0.831 | -0.841 |
| GMCSF | 1.151 | 2.094 |
| IFNab | 0.762 | 1.321 |
| IFNg | -0.294 | -1.109 |
| IFNg_GMCSF1 | -0.962 | -0.628 |
| Rv1432_day32 | -3.055 | -2.926 |
| Rv1565c_day32 | 0.539 | -3.852 |
| secA2_input | -1.277 | -0.211 |
| delta_Rv3594 | 0.089 | 0.101 |
| delta_Rv3717 | -0.238 | -0.448 |
| delta_Rv3811 | -0.165 | -0.094 |
| delta_Rv0954 | -2.079 | -1.009 |
| PonA1 | 0.054 | -1.103 |
| EccD1_KO | -0.743 | 0.135 |
| EspI_KO | 0.165 | 0.342 |
| PE35_KO | 0.887 | -0.502 |
| PPE68_KO | -0.032 | -0.618 |
| glycerol2 | -0.085 | 2.046 |
| lignocerate | -1.023 | 0.645 |
| oleate | -4.004 | 0.305 |
| phosphatidylcholine | -0.098 | 1.689 |
| acetate | 0.0 | -0.362 |
| glucAc | -0.52 | -0.715 |
| Rv0950ko | -0.241 | 0.326 |
| Rv1096ko | -1.089 | -0.199 |
| Rv3684ko | -1.104 | 0.174 |
| delta_otsA_trehalose | -0.19 | -0.88 |