TnSeqCorr

Top 10 genes with highest correlation to Rv2091c/-:

update plotcorrelationlink to info on gene
Rv2672/- (cc=0.6824) info on Rv2672/-
Rv1823/- (cc=0.6767) info on Rv1823/-
Rv3869/eccB1 (cc=0.6614) info on Rv3869/eccB1
Rv1824/- (cc=0.6601) info on Rv1824/-
Rv3197/- (cc=0.6526) info on Rv3197/-
Rv2467/pepN (cc=0.6447) info on Rv2467/pepN
Rv2140c/TB18.6 (cc=0.6447) info on Rv2140c/TB18.6
Rv3616c/espA (cc=0.642) info on Rv3616c/espA
Rv3870/eccCa1 (cc=0.6415) info on Rv3870/eccCa1
Rv1825/- (cc=0.6289) info on Rv1825/-

Correlation of Rv2091c/- with Rv2467/pepN

Normalized LFCs for Rv2091c/-:
(description and provenance of datasets)
Rv2091c/-Rv2467/pepN
Fe_supp_jason_reseq

1.432

3.498

low_pH_jason_reseq

-0.796

0.831

NO_jason_reseq

-2.625

-1.016

B6_jason_reseq

-1.862

-0.311

MHCII_jason_reseq

-0.892

1.018

Isoniazid02

-0.109

-0.077

Rifampicin4

-3.106

-0.915

Ethambutol3

0.674

0.18

Meropenem3

2.1

0.049

Vancomycin16

-0.409

-0.17

Rv2680_day32

-2.156

-0.75

H37Rv_KO_MarP

5.856

0.388

hypoxia_3wks

-2.373

-1.017

hypoxia_6wks

-3.817

-1.432

glycerol

0.05

1.006

cholesterol

-0.929

1.421

AJ

-2.266

-0.482

Bibs02

-2.134

-0.55

Bibs02c

-1.734

0.674

BL6

-3.158

-1.549

BL6a

-2.274

0.218

BXD01

-3.592

-1.286

BXD010

-3.425

-1.363

BXD011

-2.647

-0.886

BXD03

-3.323

-0.487

BXD04

-3.41

-0.896

BXD05

-2.993

-1.38

BXD06

-3.57

-1.368

BXD07

-3.232

-0.888

BXD08

-3.268

-0.622

BXD09

-3.548

-1.614

CAST

-4.228

-1.602

CCcont

-0.365

0.399

DS01

-3.251

-1.389

DS02

-1.344

-1.843

DS04

-3.123

-1.844

DS0c

-4.062

-0.781

GP01

-2.813

-0.278

GP02

-2.453

-0.063

GP0c

-3.282

-1.437

NOD

-0.675

-1.266

NZO

-3.661

-1.075

PWK

-4.362

-1.662

H37Rv_KO_CtpC

-0.397

0.36

H37Rv_KO_CtpD

-2.003

-0.309

H37Rv_KO_Rv1272

-2.399

0.0

H37Rv_KO_SugABC

-1.783

-0.206

H37Rv_KO_MbtN

-1.127

-0.015

Trans05

-3.128

-1.558

macrophage_unactivated

-0.066

0.511

IL1

0.184

0.481

Rapamycin

0.433

0.307

Tcell

-0.831

0.821

GMCSF

1.151

-0.38

IFNab

0.762

-0.671

IFNg

-0.294

0.179

IFNg_GMCSF1

-0.962

0.0

Rv1432_day32

-3.055

0.687

Rv1565c_day32

0.539

0.261

secA2_input

-1.277

0.573

delta_Rv3594

0.089

2.216

delta_Rv3717

-0.238

0.784

delta_Rv3811

-0.165

1.785

delta_Rv0954

-2.079

0.364

PonA1

0.054

0.044

EccD1_KO

-0.743

0.99

EspI_KO

0.165

1.095

PE35_KO

0.887

1.286

PPE68_KO

-0.032

1.725

glycerol2

-0.085

-0.178

lignocerate

-1.023

-0.564

oleate

-4.004

-1.598

phosphatidylcholine

-0.098

-0.241

acetate

0.0

0.46

glucAc

-0.52

0.295

Rv0950ko

-0.241

0.103

Rv1096ko

-1.089

0.202

Rv3684ko

-1.104

1.159

delta_otsA_trehalose

-0.19

0.437