TnSeqCorr

Top 10 genes with highest correlation to Rv2091c/-:

update plotcorrelationlink to info on gene
Rv2672/- (cc=0.6824) info on Rv2672/-
Rv1823/- (cc=0.6767) info on Rv1823/-
Rv3869/eccB1 (cc=0.6614) info on Rv3869/eccB1
Rv1824/- (cc=0.6601) info on Rv1824/-
Rv3197/- (cc=0.6526) info on Rv3197/-
Rv2467/pepN (cc=0.6447) info on Rv2467/pepN
Rv2140c/TB18.6 (cc=0.6447) info on Rv2140c/TB18.6
Rv3616c/espA (cc=0.642) info on Rv3616c/espA
Rv3870/eccCa1 (cc=0.6415) info on Rv3870/eccCa1
Rv1825/- (cc=0.6289) info on Rv1825/-

Correlation of Rv2091c/- with Rv1825/-

Normalized LFCs for Rv2091c/-:
(description and provenance of datasets)
Rv2091c/-Rv1825/-
Fe_supp_jason_reseq

1.432

1.331

low_pH_jason_reseq

-0.796

0.882

NO_jason_reseq

-2.625

0.11

B6_jason_reseq

-1.862

-0.201

MHCII_jason_reseq

-0.892

1.275

Isoniazid02

-0.109

-0.159

Rifampicin4

-3.106

-2.139

Ethambutol3

0.674

-1.25

Meropenem3

2.1

-0.98

Vancomycin16

-0.409

-4.117

Rv2680_day32

-2.156

-2.124

H37Rv_KO_MarP

5.856

5.297

hypoxia_3wks

-2.373

-0.526

hypoxia_6wks

-3.817

-1.666

glycerol

0.05

0.592

cholesterol

-0.929

-0.55

AJ

-2.266

-1.175

Bibs02

-2.134

-1.93

Bibs02c

-1.734

-0.576

BL6

-3.158

-2.518

BL6a

-2.274

-0.854

BXD01

-3.592

-1.168

BXD010

-3.425

-2.64

BXD011

-2.647

-1.081

BXD03

-3.323

-1.008

BXD04

-3.41

-0.098

BXD05

-2.993

-2.097

BXD06

-3.57

-1.689

BXD07

-3.232

-1.515

BXD08

-3.268

-0.491

BXD09

-3.548

-1.95

CAST

-4.228

-2.302

CCcont

-0.365

-0.118

DS01

-3.251

-2.989

DS02

-1.344

-2.379

DS04

-3.123

-3.277

DS0c

-4.062

-1.075

GP01

-2.813

-2.036

GP02

-2.453

-1.849

GP0c

-3.282

-0.797

NOD

-0.675

-1.738

NZO

-3.661

-1.126

PWK

-4.362

-3.53

H37Rv_KO_CtpC

-0.397

0.066

H37Rv_KO_CtpD

-2.003

-0.808

H37Rv_KO_Rv1272

-2.399

0.574

H37Rv_KO_SugABC

-1.783

-0.657

H37Rv_KO_MbtN

-1.127

-0.57

Trans05

-3.128

-0.536

macrophage_unactivated

-0.066

0.978

IL1

0.184

1.124

Rapamycin

0.433

0.424

Tcell

-0.831

0.0

GMCSF

1.151

0.499

IFNab

0.762

-0.762

IFNg

-0.294

-0.238

IFNg_GMCSF1

-0.962

0.349

Rv1432_day32

-3.055

-1.832

Rv1565c_day32

0.539

1.72

secA2_input

-1.277

-0.142

delta_Rv3594

0.089

0.0

delta_Rv3717

-0.238

-2.035

delta_Rv3811

-0.165

-0.291

delta_Rv0954

-2.079

-0.575

PonA1

0.054

-0.226

EccD1_KO

-0.743

-1.746

EspI_KO

0.165

-0.967

PE35_KO

0.887

0.306

PPE68_KO

-0.032

-0.851

glycerol2

-0.085

-1.777

lignocerate

-1.023

-1.108

oleate

-4.004

-0.56

phosphatidylcholine

-0.098

0.396

acetate

0.0

0.123

glucAc

-0.52

0.085

Rv0950ko

-0.241

0.443

Rv1096ko

-1.089

-1.888

Rv3684ko

-1.104

-0.668

delta_otsA_trehalose

-0.19

-0.725