TnSeqCorr

Top 10 genes with highest correlation to Rv2091c/-:

update plotcorrelationlink to info on gene
Rv2672/- (cc=0.6824) info on Rv2672/-
Rv1823/- (cc=0.6767) info on Rv1823/-
Rv3869/eccB1 (cc=0.6614) info on Rv3869/eccB1
Rv1824/- (cc=0.6601) info on Rv1824/-
Rv3197/- (cc=0.6526) info on Rv3197/-
Rv2467/pepN (cc=0.6447) info on Rv2467/pepN
Rv2140c/TB18.6 (cc=0.6447) info on Rv2140c/TB18.6
Rv3616c/espA (cc=0.642) info on Rv3616c/espA
Rv3870/eccCa1 (cc=0.6415) info on Rv3870/eccCa1
Rv1825/- (cc=0.6289) info on Rv1825/-

Correlation of Rv2091c/- with Rv2672/-

Normalized LFCs for Rv2091c/-:
(description and provenance of datasets)
Rv2091c/-Rv2672/-
Fe_supp_jason_reseq

1.432

2.265

low_pH_jason_reseq

-0.796

0.447

NO_jason_reseq

-2.625

-2.103

B6_jason_reseq

-1.862

0.114

MHCII_jason_reseq

-0.892

0.051

Isoniazid02

-0.109

1.539

Rifampicin4

-3.106

-0.842

Ethambutol3

0.674

0.203

Meropenem3

2.1

-0.072

Vancomycin16

-0.409

0.117

Rv2680_day32

-2.156

-1.259

H37Rv_KO_MarP

5.856

1.587

hypoxia_3wks

-2.373

-0.845

hypoxia_6wks

-3.817

-3.046

glycerol

0.05

0.674

cholesterol

-0.929

-0.507

AJ

-2.266

-1.407

Bibs02

-2.134

-0.498

Bibs02c

-1.734

-0.3

BL6

-3.158

-0.738

BL6a

-2.274

-1.07

BXD01

-3.592

-1.586

BXD010

-3.425

-1.277

BXD011

-2.647

-1.177

BXD03

-3.323

-1.871

BXD04

-3.41

-2.258

BXD05

-2.993

-1.41

BXD06

-3.57

-2.297

BXD07

-3.232

-1.82

BXD08

-3.268

-0.854

BXD09

-3.548

-1.547

CAST

-4.228

-1.782

CCcont

-0.365

0.955

DS01

-3.251

-1.093

DS02

-1.344

-0.195

DS04

-3.123

-1.84

DS0c

-4.062

-0.36

GP01

-2.813

-0.319

GP02

-2.453

-1.151

GP0c

-3.282

-0.131

NOD

-0.675

-1.648

NZO

-3.661

-0.568

PWK

-4.362

-1.597

H37Rv_KO_CtpC

-0.397

-0.269

H37Rv_KO_CtpD

-2.003

0.36

H37Rv_KO_Rv1272

-2.399

-1.062

H37Rv_KO_SugABC

-1.783

1.062

H37Rv_KO_MbtN

-1.127

-0.977

Trans05

-3.128

-1.476

macrophage_unactivated

-0.066

0.319

IL1

0.184

0.05

Rapamycin

0.433

-0.052

Tcell

-0.831

-1.15

GMCSF

1.151

1.341

IFNab

0.762

1.421

IFNg

-0.294

1.05

IFNg_GMCSF1

-0.962

0.613

Rv1432_day32

-3.055

-2.564

Rv1565c_day32

0.539

-0.313

secA2_input

-1.277

0.933

delta_Rv3594

0.089

0.595

delta_Rv3717

-0.238

0.179

delta_Rv3811

-0.165

0.308

delta_Rv0954

-2.079

0.762

PonA1

0.054

-0.885

EccD1_KO

-0.743

0.638

EspI_KO

0.165

-0.348

PE35_KO

0.887

0.149

PPE68_KO

-0.032

-0.211

glycerol2

-0.085

-1.333

lignocerate

-1.023

-1.045

oleate

-4.004

-3.595

phosphatidylcholine

-0.098

-1.244

acetate

0.0

0.261

glucAc

-0.52

0.034

Rv0950ko

-0.241

0.715

Rv1096ko

-1.089

0.115

Rv3684ko

-1.104

-0.128

delta_otsA_trehalose

-0.19

-1.288