Top 10 genes with highest correlation to Rv2011c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2623/TB31.7 | (cc=0.4728) | info on Rv2623/TB31.7 |
| Rv0590A/- | (cc=0.4578) | info on Rv0590A/- |
| Rv0829/- | (cc=0.4435) | info on Rv0829/- |
| Rv1352/- | (cc=0.4417) | info on Rv1352/- |
| Rv1725c/- | (cc=0.4186) | info on Rv1725c/- |
| Rv2919c/glnB | (cc=0.4182) | info on Rv2919c/glnB |
| Rv0349/- | (cc=0.4145) | info on Rv0349/- |
| Rv2416c/eis | (cc=0.4097) | info on Rv2416c/eis |
| Rv0084/hycD | (cc=0.4044) | info on Rv0084/hycD |
| Rv1038c/esxJ | (cc=0.399) | info on Rv1038c/esxJ |
Correlation of Rv2011c/- with Rv2623/TB31.7
Normalized LFCs for Rv2011c/-:
(description and provenance of datasets)
| Rv2011c/- | Rv2623/TB31.7 | |
| Fe_supp_jason_reseq | 0.818 | 0.136 |
| low_pH_jason_reseq | -0.318 | -1.054 |
| NO_jason_reseq | -0.142 | 0.281 |
| B6_jason_reseq | 0.151 | -0.777 |
| MHCII_jason_reseq | -0.09 | 0.0 |
| Isoniazid02 | 0.194 | -0.297 |
| Rifampicin4 | 0.236 | -0.818 |
| Ethambutol3 | 0.083 | -0.728 |
| Meropenem3 | 0.305 | 4.781 |
| Vancomycin16 | -0.273 | -0.379 |
| Rv2680_day32 | -1.585 | -0.725 |
| H37Rv_KO_MarP | 0.594 | -0.071 |
| hypoxia_3wks | -0.666 | -4.191 |
| hypoxia_6wks | -1.326 | -4.074 |
| glycerol | -1.624 | -0.164 |
| cholesterol | 0.107 | -0.159 |
| AJ | 0.82 | -0.998 |
| Bibs02 | 2.152 | -0.256 |
| Bibs02c | 0.299 | 0.774 |
| BL6 | 0.613 | 0.847 |
| BL6a | 0.304 | 0.621 |
| BXD01 | 0.84 | -0.07 |
| BXD010 | 0.498 | -1.728 |
| BXD011 | 0.329 | -0.523 |
| BXD03 | 0.736 | 0.821 |
| BXD04 | 0.654 | -0.556 |
| BXD05 | 0.712 | -1.289 |
| BXD06 | -0.052 | -0.803 |
| BXD07 | 0.931 | -0.392 |
| BXD08 | -0.716 | -0.546 |
| BXD09 | 0.571 | -0.398 |
| CAST | 1.338 | -0.062 |
| CCcont | 0.62 | 0.235 |
| DS01 | 0.465 | -0.4 |
| DS02 | -1.171 | -0.336 |
| DS04 | 0.651 | -1.166 |
| DS0c | 0.211 | -0.303 |
| GP01 | -0.619 | -1.727 |
| GP02 | 1.254 | -0.208 |
| GP0c | 0.891 | -0.413 |
| NOD | -0.148 | 1.01 |
| NZO | -0.214 | -0.6 |
| PWK | -0.156 | -0.844 |
| H37Rv_KO_CtpC | 1.037 | 0.181 |
| H37Rv_KO_CtpD | -1.246 | -0.52 |
| H37Rv_KO_Rv1272 | 1.706 | -0.329 |
| H37Rv_KO_SugABC | -0.644 | -2.054 |
| H37Rv_KO_MbtN | -0.43 | -0.208 |
| Trans05 | 0.389 | 0.642 |
| macrophage_unactivated | 0.83 | -0.925 |
| IL1 | 0.469 | -0.762 |
| Rapamycin | -0.104 | -0.092 |
| Tcell | 0.072 | -0.955 |
| GMCSF | 0.932 | 0.153 |
| IFNab | 0.565 | -0.469 |
| IFNg | 0.778 | -0.879 |
| IFNg_GMCSF1 | 0.035 | 0.0 |
| Rv1432_day32 | -0.192 | 2.115 |
| Rv1565c_day32 | -0.15 | 0.218 |
| secA2_input | 0.238 | 0.495 |
| delta_Rv3594 | 1.938 | 0.24 |
| delta_Rv3717 | 0.714 | 0.029 |
| delta_Rv3811 | 2.51 | 0.5 |
| delta_Rv0954 | 1.092 | 0.061 |
| PonA1 | 1.819 | 0.553 |
| EccD1_KO | 1.565 | 2.319 |
| EspI_KO | 1.166 | 0.953 |
| PE35_KO | 2.161 | 2.535 |
| PPE68_KO | 2.061 | 1.597 |
| glycerol2 | 1.125 | 1.195 |
| lignocerate | 1.991 | 2.075 |
| oleate | -1.853 | -1.626 |
| phosphatidylcholine | 1.197 | 1.401 |
| acetate | 1.393 | 2.244 |
| glucAc | 1.649 | 2.361 |
| Rv0950ko | 0.042 | -1.224 |
| Rv1096ko | -0.407 | -1.279 |
| Rv3684ko | 1.405 | -1.565 |
| delta_otsA_trehalose | -0.592 | -0.429 |