Top 10 genes with highest correlation to Rv2011c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2623/TB31.7 | (cc=0.4728) | info on Rv2623/TB31.7 |
| Rv0590A/- | (cc=0.4578) | info on Rv0590A/- |
| Rv0829/- | (cc=0.4435) | info on Rv0829/- |
| Rv1352/- | (cc=0.4417) | info on Rv1352/- |
| Rv1725c/- | (cc=0.4186) | info on Rv1725c/- |
| Rv2919c/glnB | (cc=0.4182) | info on Rv2919c/glnB |
| Rv0349/- | (cc=0.4145) | info on Rv0349/- |
| Rv2416c/eis | (cc=0.4097) | info on Rv2416c/eis |
| Rv0084/hycD | (cc=0.4044) | info on Rv0084/hycD |
| Rv1038c/esxJ | (cc=0.399) | info on Rv1038c/esxJ |
Correlation of Rv2011c/- with Rv0084/hycD
Normalized LFCs for Rv2011c/-:
(description and provenance of datasets)
| Rv2011c/- | Rv0084/hycD | |
| Fe_supp_jason_reseq | 0.818 | -1.171 |
| low_pH_jason_reseq | -0.318 | 0.432 |
| NO_jason_reseq | -0.142 | -1.024 |
| B6_jason_reseq | 0.151 | -0.769 |
| MHCII_jason_reseq | -0.09 | -1.214 |
| Isoniazid02 | 0.194 | 0.058 |
| Rifampicin4 | 0.236 | 0.601 |
| Ethambutol3 | 0.083 | -0.05 |
| Meropenem3 | 0.305 | -0.435 |
| Vancomycin16 | -0.273 | 0.544 |
| Rv2680_day32 | -1.585 | -1.581 |
| H37Rv_KO_MarP | 0.594 | 0.356 |
| hypoxia_3wks | -0.666 | -0.77 |
| hypoxia_6wks | -1.326 | -0.804 |
| glycerol | -1.624 | 1.167 |
| cholesterol | 0.107 | 0.132 |
| AJ | 0.82 | 0.054 |
| Bibs02 | 2.152 | -1.005 |
| Bibs02c | 0.299 | 0.767 |
| BL6 | 0.613 | -0.045 |
| BL6a | 0.304 | -0.595 |
| BXD01 | 0.84 | -1.074 |
| BXD010 | 0.498 | -0.469 |
| BXD011 | 0.329 | -0.305 |
| BXD03 | 0.736 | -0.344 |
| BXD04 | 0.654 | -0.632 |
| BXD05 | 0.712 | -0.342 |
| BXD06 | -0.052 | -0.133 |
| BXD07 | 0.931 | 0.228 |
| BXD08 | -0.716 | -0.814 |
| BXD09 | 0.571 | -0.491 |
| CAST | 1.338 | -1.176 |
| CCcont | 0.62 | 0.087 |
| DS01 | 0.465 | -0.115 |
| DS02 | -1.171 | -0.274 |
| DS04 | 0.651 | 0.415 |
| DS0c | 0.211 | -0.245 |
| GP01 | -0.619 | -2.056 |
| GP02 | 1.254 | -1.663 |
| GP0c | 0.891 | -1.292 |
| NOD | -0.148 | -1.575 |
| NZO | -0.214 | 0.202 |
| PWK | -0.156 | 0.8 |
| H37Rv_KO_CtpC | 1.037 | -0.413 |
| H37Rv_KO_CtpD | -1.246 | -1.516 |
| H37Rv_KO_Rv1272 | 1.706 | 0.049 |
| H37Rv_KO_SugABC | -0.644 | -1.262 |
| H37Rv_KO_MbtN | -0.43 | -1.771 |
| Trans05 | 0.389 | -1.614 |
| macrophage_unactivated | 0.83 | -1.076 |
| IL1 | 0.469 | -0.392 |
| Rapamycin | -0.104 | 0.942 |
| Tcell | 0.072 | -0.958 |
| GMCSF | 0.932 | 0.916 |
| IFNab | 0.565 | -0.079 |
| IFNg | 0.778 | -0.353 |
| IFNg_GMCSF1 | 0.035 | -0.641 |
| Rv1432_day32 | -0.192 | -0.353 |
| Rv1565c_day32 | -0.15 | -1.494 |
| secA2_input | 0.238 | -0.742 |
| delta_Rv3594 | 1.938 | -0.895 |
| delta_Rv3717 | 0.714 | -0.405 |
| delta_Rv3811 | 2.51 | 0.842 |
| delta_Rv0954 | 1.092 | -1.905 |
| PonA1 | 1.819 | -1.27 |
| EccD1_KO | 1.565 | 1.595 |
| EspI_KO | 1.166 | 1.184 |
| PE35_KO | 2.161 | 2.917 |
| PPE68_KO | 2.061 | 3.2 |
| glycerol2 | 1.125 | 0.311 |
| lignocerate | 1.991 | 1.581 |
| oleate | -1.853 | -1.791 |
| phosphatidylcholine | 1.197 | 0.517 |
| acetate | 1.393 | 1.807 |
| glucAc | 1.649 | 1.618 |
| Rv0950ko | 0.042 | -0.88 |
| Rv1096ko | -0.407 | 0.121 |
| Rv3684ko | 1.405 | -0.203 |
| delta_otsA_trehalose | -0.592 | -0.843 |