Top 10 genes with highest correlation to Rv2011c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2623/TB31.7 | (cc=0.4728) | info on Rv2623/TB31.7 |
| Rv0590A/- | (cc=0.4578) | info on Rv0590A/- |
| Rv0829/- | (cc=0.4435) | info on Rv0829/- |
| Rv1352/- | (cc=0.4417) | info on Rv1352/- |
| Rv1725c/- | (cc=0.4186) | info on Rv1725c/- |
| Rv2919c/glnB | (cc=0.4182) | info on Rv2919c/glnB |
| Rv0349/- | (cc=0.4145) | info on Rv0349/- |
| Rv2416c/eis | (cc=0.4097) | info on Rv2416c/eis |
| Rv0084/hycD | (cc=0.4044) | info on Rv0084/hycD |
| Rv1038c/esxJ | (cc=0.399) | info on Rv1038c/esxJ |
Correlation of Rv2011c/- with Rv1038c/esxJ
Normalized LFCs for Rv2011c/-:
(description and provenance of datasets)
| Rv2011c/- | Rv1038c/esxJ | |
| Fe_supp_jason_reseq | 0.818 | 0.302 |
| low_pH_jason_reseq | -0.318 | -0.724 |
| NO_jason_reseq | -0.142 | -0.436 |
| B6_jason_reseq | 0.151 | -0.523 |
| MHCII_jason_reseq | -0.09 | 0.249 |
| Isoniazid02 | 0.194 | -0.41 |
| Rifampicin4 | 0.236 | -0.495 |
| Ethambutol3 | 0.083 | 0.225 |
| Meropenem3 | 0.305 | 0.491 |
| Vancomycin16 | -0.273 | -1.329 |
| Rv2680_day32 | -1.585 | -0.177 |
| H37Rv_KO_MarP | 0.594 | 0.772 |
| hypoxia_3wks | -0.666 | -0.993 |
| hypoxia_6wks | -1.326 | -1.151 |
| glycerol | -1.624 | 0.423 |
| cholesterol | 0.107 | -0.552 |
| AJ | 0.82 | -0.842 |
| Bibs02 | 2.152 | 0.411 |
| Bibs02c | 0.299 | -0.1 |
| BL6 | 0.613 | 1.316 |
| BL6a | 0.304 | -0.864 |
| BXD01 | 0.84 | 0.125 |
| BXD010 | 0.498 | -0.634 |
| BXD011 | 0.329 | -1.466 |
| BXD03 | 0.736 | -1.113 |
| BXD04 | 0.654 | -1.114 |
| BXD05 | 0.712 | -0.336 |
| BXD06 | -0.052 | -0.509 |
| BXD07 | 0.931 | -0.793 |
| BXD08 | -0.716 | -1.279 |
| BXD09 | 0.571 | -1.072 |
| CAST | 1.338 | 0.701 |
| CCcont | 0.62 | 0.055 |
| DS01 | 0.465 | -0.161 |
| DS02 | -1.171 | -0.948 |
| DS04 | 0.651 | -1.678 |
| DS0c | 0.211 | -0.896 |
| GP01 | -0.619 | -0.883 |
| GP02 | 1.254 | 0.533 |
| GP0c | 0.891 | -0.304 |
| NOD | -0.148 | 1.053 |
| NZO | -0.214 | -0.142 |
| PWK | -0.156 | -0.669 |
| H37Rv_KO_CtpC | 1.037 | 0.479 |
| H37Rv_KO_CtpD | -1.246 | 0.146 |
| H37Rv_KO_Rv1272 | 1.706 | -0.271 |
| H37Rv_KO_SugABC | -0.644 | -1.56 |
| H37Rv_KO_MbtN | -0.43 | -1.923 |
| Trans05 | 0.389 | -0.246 |
| macrophage_unactivated | 0.83 | 0.117 |
| IL1 | 0.469 | -0.068 |
| Rapamycin | -0.104 | 0.463 |
| Tcell | 0.072 | -0.358 |
| GMCSF | 0.932 | 1.18 |
| IFNab | 0.565 | 0.311 |
| IFNg | 0.778 | -0.208 |
| IFNg_GMCSF1 | 0.035 | -0.723 |
| Rv1432_day32 | -0.192 | 0.965 |
| Rv1565c_day32 | -0.15 | -0.15 |
| secA2_input | 0.238 | -0.027 |
| delta_Rv3594 | 1.938 | -0.353 |
| delta_Rv3717 | 0.714 | 0.019 |
| delta_Rv3811 | 2.51 | -0.54 |
| delta_Rv0954 | 1.092 | 0.133 |
| PonA1 | 1.819 | 0.175 |
| EccD1_KO | 1.565 | 0.835 |
| EspI_KO | 1.166 | 0.1 |
| PE35_KO | 2.161 | 0.72 |
| PPE68_KO | 2.061 | 0.861 |
| glycerol2 | 1.125 | 2.5 |
| lignocerate | 1.991 | 3.087 |
| oleate | -1.853 | -0.116 |
| phosphatidylcholine | 1.197 | 2.105 |
| acetate | 1.393 | 2.793 |
| glucAc | 1.649 | 3.101 |
| Rv0950ko | 0.042 | 0.516 |
| Rv1096ko | -0.407 | 0.516 |
| Rv3684ko | 1.405 | -0.396 |
| delta_otsA_trehalose | -0.592 | 0.257 |