Top 10 genes with highest correlation to Rv2007c/fdxA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.7036) | info on Rv2237A/- |
| Rv1999c/- | (cc=0.6802) | info on Rv1999c/- |
| Rv0379/secE2 | (cc=0.6618) | info on Rv0379/secE2 |
| Rv0089/- | (cc=0.6472) | info on Rv0089/- |
| Rv0008c/- | (cc=0.6455) | info on Rv0008c/- |
| Rv1738/- | (cc=0.6422) | info on Rv1738/- |
| Rv1852/ureG | (cc=0.6385) | info on Rv1852/ureG |
| Rv3354/- | (cc=0.6379) | info on Rv3354/- |
| Rv1880c/cyp140 | (cc=0.6354) | info on Rv1880c/cyp140 |
| Rv2426c/- | (cc=0.6293) | info on Rv2426c/- |
Correlation of Rv2007c/fdxA with Rv1880c/cyp140
Normalized LFCs for Rv2007c/fdxA:
(description and provenance of datasets)
| Rv2007c/fdxA | Rv1880c/cyp140 | |
| Fe_supp_jason_reseq | -0.204 | -0.706 |
| low_pH_jason_reseq | -1.392 | -0.391 |
| NO_jason_reseq | -0.11 | 0.084 |
| B6_jason_reseq | 1.433 | -0.111 |
| MHCII_jason_reseq | 0.95 | 0.084 |
| Isoniazid02 | 1.404 | 0.866 |
| Rifampicin4 | -0.504 | -0.533 |
| Ethambutol3 | 0.536 | 0.652 |
| Meropenem3 | 0.058 | 0.491 |
| Vancomycin16 | -0.151 | -0.05 |
| Rv2680_day32 | 0.81 | 0.843 |
| H37Rv_KO_MarP | 0.46 | -0.464 |
| hypoxia_3wks | -0.742 | -0.319 |
| hypoxia_6wks | -0.472 | 0.0 |
| glycerol | 0.009 | -0.456 |
| cholesterol | 0.168 | 0.304 |
| AJ | 0.39 | -0.203 |
| Bibs02 | -0.584 | 0.634 |
| Bibs02c | -0.608 | -0.15 |
| BL6 | -0.133 | -0.613 |
| BL6a | -1.979 | -0.748 |
| BXD01 | -0.994 | -0.52 |
| BXD010 | -2.471 | -0.243 |
| BXD011 | -0.939 | -0.058 |
| BXD03 | -1.307 | -0.763 |
| BXD04 | -1.409 | -0.177 |
| BXD05 | -0.376 | -0.007 |
| BXD06 | -0.973 | -0.403 |
| BXD07 | -1.338 | -0.734 |
| BXD08 | -1.695 | -0.42 |
| BXD09 | -1.372 | -0.829 |
| CAST | 0.507 | 0.259 |
| CCcont | -0.943 | -0.744 |
| DS01 | 0.464 | -0.351 |
| DS02 | 0.545 | -0.614 |
| DS04 | 0.275 | -0.535 |
| DS0c | 0.859 | -0.121 |
| GP01 | -2.45 | -0.423 |
| GP02 | -2.63 | -0.115 |
| GP0c | -1.015 | -0.789 |
| NOD | 0.433 | 0.407 |
| NZO | 0.585 | 0.215 |
| PWK | 0.618 | 0.141 |
| H37Rv_KO_CtpC | -0.737 | -0.903 |
| H37Rv_KO_CtpD | -0.202 | -0.506 |
| H37Rv_KO_Rv1272 | 1.003 | 0.208 |
| H37Rv_KO_SugABC | -1.786 | -0.763 |
| H37Rv_KO_MbtN | -0.852 | -1.618 |
| Trans05 | 0.514 | -0.287 |
| macrophage_unactivated | -1.042 | -1.102 |
| IL1 | -1.317 | -0.255 |
| Rapamycin | -0.46 | -0.519 |
| Tcell | -1.496 | -0.28 |
| GMCSF | 0.436 | -0.021 |
| IFNab | -0.795 | -0.481 |
| IFNg | 0.337 | -0.684 |
| IFNg_GMCSF1 | 1.603 | -0.189 |
| Rv1432_day32 | 0.0 | -0.175 |
| Rv1565c_day32 | -0.327 | 0.663 |
| secA2_input | -1.791 | -0.454 |
| delta_Rv3594 | -0.376 | 0.124 |
| delta_Rv3717 | -0.019 | -0.41 |
| delta_Rv3811 | -0.758 | -0.012 |
| delta_Rv0954 | -0.397 | 0.032 |
| PonA1 | -2.163 | 0.057 |
| EccD1_KO | 0.46 | 0.582 |
| EspI_KO | 0.522 | 0.482 |
| PE35_KO | 0.837 | 0.63 |
| PPE68_KO | 0.79 | 0.464 |
| glycerol2 | 2.254 | 1.843 |
| lignocerate | 3.177 | 0.972 |
| oleate | -0.105 | 0.418 |
| phosphatidylcholine | 2.724 | 1.036 |
| acetate | 3.607 | 0.49 |
| glucAc | 3.073 | 0.36 |
| Rv0950ko | 2.174 | 0.709 |
| Rv1096ko | 1.167 | 0.241 |
| Rv3684ko | 2.394 | 0.196 |
| delta_otsA_trehalose | 3.412 | 1.179 |