Top 10 genes with highest correlation to Rv2007c/fdxA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.7036) | info on Rv2237A/- |
| Rv1999c/- | (cc=0.6802) | info on Rv1999c/- |
| Rv0379/secE2 | (cc=0.6618) | info on Rv0379/secE2 |
| Rv0089/- | (cc=0.6472) | info on Rv0089/- |
| Rv0008c/- | (cc=0.6455) | info on Rv0008c/- |
| Rv1738/- | (cc=0.6422) | info on Rv1738/- |
| Rv1852/ureG | (cc=0.6385) | info on Rv1852/ureG |
| Rv3354/- | (cc=0.6379) | info on Rv3354/- |
| Rv1880c/cyp140 | (cc=0.6354) | info on Rv1880c/cyp140 |
| Rv2426c/- | (cc=0.6293) | info on Rv2426c/- |
Correlation of Rv2007c/fdxA with Rv0089/-
Normalized LFCs for Rv2007c/fdxA:
(description and provenance of datasets)
| Rv2007c/fdxA | Rv0089/- | |
| Fe_supp_jason_reseq | -0.204 | -0.617 |
| low_pH_jason_reseq | -1.392 | -0.221 |
| NO_jason_reseq | -0.11 | 0.047 |
| B6_jason_reseq | 1.433 | 0.241 |
| MHCII_jason_reseq | 0.95 | 0.487 |
| Isoniazid02 | 1.404 | 0.877 |
| Rifampicin4 | -0.504 | -0.701 |
| Ethambutol3 | 0.536 | -0.483 |
| Meropenem3 | 0.058 | -0.564 |
| Vancomycin16 | -0.151 | 0.0 |
| Rv2680_day32 | 0.81 | 1.554 |
| H37Rv_KO_MarP | 0.46 | 1.943 |
| hypoxia_3wks | -0.742 | -0.59 |
| hypoxia_6wks | -0.472 | -0.699 |
| glycerol | 0.009 | -1.188 |
| cholesterol | 0.168 | -0.61 |
| AJ | 0.39 | 0.069 |
| Bibs02 | -0.584 | 0.098 |
| Bibs02c | -0.608 | 0.0 |
| BL6 | -0.133 | -1.724 |
| BL6a | -1.979 | -1.411 |
| BXD01 | -0.994 | -1.681 |
| BXD010 | -2.471 | -1.478 |
| BXD011 | -0.939 | -1.727 |
| BXD03 | -1.307 | -1.397 |
| BXD04 | -1.409 | -0.973 |
| BXD05 | -0.376 | -1.529 |
| BXD06 | -0.973 | -1.642 |
| BXD07 | -1.338 | -2.006 |
| BXD08 | -1.695 | -2.382 |
| BXD09 | -1.372 | -1.596 |
| CAST | 0.507 | 0.492 |
| CCcont | -0.943 | -0.977 |
| DS01 | 0.464 | -0.209 |
| DS02 | 0.545 | 0.153 |
| DS04 | 0.275 | 0.462 |
| DS0c | 0.859 | 0.308 |
| GP01 | -2.45 | 0.326 |
| GP02 | -2.63 | -1.336 |
| GP0c | -1.015 | -0.489 |
| NOD | 0.433 | 0.145 |
| NZO | 0.585 | -0.1 |
| PWK | 0.618 | 0.389 |
| H37Rv_KO_CtpC | -0.737 | -1.138 |
| H37Rv_KO_CtpD | -0.202 | -3.064 |
| H37Rv_KO_Rv1272 | 1.003 | -0.742 |
| H37Rv_KO_SugABC | -1.786 | -0.481 |
| H37Rv_KO_MbtN | -0.852 | -1.571 |
| Trans05 | 0.514 | 0.008 |
| macrophage_unactivated | -1.042 | -2.727 |
| IL1 | -1.317 | -1.246 |
| Rapamycin | -0.46 | -2.071 |
| Tcell | -1.496 | -1.3 |
| GMCSF | 0.436 | -1.848 |
| IFNab | -0.795 | -2.524 |
| IFNg | 0.337 | -1.871 |
| IFNg_GMCSF1 | 1.603 | -0.936 |
| Rv1432_day32 | 0.0 | 0.301 |
| Rv1565c_day32 | -0.327 | 0.594 |
| secA2_input | -1.791 | -1.028 |
| delta_Rv3594 | -0.376 | 0.0 |
| delta_Rv3717 | -0.019 | -0.216 |
| delta_Rv3811 | -0.758 | 0.755 |
| delta_Rv0954 | -0.397 | 0.442 |
| PonA1 | -2.163 | -0.308 |
| EccD1_KO | 0.46 | -0.118 |
| EspI_KO | 0.522 | 1.221 |
| PE35_KO | 0.837 | 0.204 |
| PPE68_KO | 0.79 | 1.497 |
| glycerol2 | 2.254 | 1.494 |
| lignocerate | 3.177 | 1.736 |
| oleate | -0.105 | -0.505 |
| phosphatidylcholine | 2.724 | 1.304 |
| acetate | 3.607 | 2.168 |
| glucAc | 3.073 | 1.508 |
| Rv0950ko | 2.174 | -0.169 |
| Rv1096ko | 1.167 | 0.983 |
| Rv3684ko | 2.394 | 1.019 |
| delta_otsA_trehalose | 3.412 | 1.304 |