Top 10 genes with highest correlation to Rv2007c/fdxA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.7036) | info on Rv2237A/- |
| Rv1999c/- | (cc=0.6802) | info on Rv1999c/- |
| Rv0379/secE2 | (cc=0.6618) | info on Rv0379/secE2 |
| Rv0089/- | (cc=0.6472) | info on Rv0089/- |
| Rv0008c/- | (cc=0.6455) | info on Rv0008c/- |
| Rv1738/- | (cc=0.6422) | info on Rv1738/- |
| Rv1852/ureG | (cc=0.6385) | info on Rv1852/ureG |
| Rv3354/- | (cc=0.6379) | info on Rv3354/- |
| Rv1880c/cyp140 | (cc=0.6354) | info on Rv1880c/cyp140 |
| Rv2426c/- | (cc=0.6293) | info on Rv2426c/- |
Correlation of Rv2007c/fdxA with Rv1738/-
Normalized LFCs for Rv2007c/fdxA:
(description and provenance of datasets)
| Rv2007c/fdxA | Rv1738/- | |
| Fe_supp_jason_reseq | -0.204 | -0.033 |
| low_pH_jason_reseq | -1.392 | 0.475 |
| NO_jason_reseq | -0.11 | 0.835 |
| B6_jason_reseq | 1.433 | 0.478 |
| MHCII_jason_reseq | 0.95 | -0.233 |
| Isoniazid02 | 1.404 | 0.201 |
| Rifampicin4 | -0.504 | 0.52 |
| Ethambutol3 | 0.536 | 0.142 |
| Meropenem3 | 0.058 | 0.588 |
| Vancomycin16 | -0.151 | 0.663 |
| Rv2680_day32 | 0.81 | 0.243 |
| H37Rv_KO_MarP | 0.46 | -0.913 |
| hypoxia_3wks | -0.742 | -2.967 |
| hypoxia_6wks | -0.472 | -2.134 |
| glycerol | 0.009 | 0.089 |
| cholesterol | 0.168 | -1.951 |
| AJ | 0.39 | -1.886 |
| Bibs02 | -0.584 | -0.734 |
| Bibs02c | -0.608 | 0.047 |
| BL6 | -0.133 | -1.763 |
| BL6a | -1.979 | -1.423 |
| BXD01 | -0.994 | -1.424 |
| BXD010 | -2.471 | -3.554 |
| BXD011 | -0.939 | -1.664 |
| BXD03 | -1.307 | -1.689 |
| BXD04 | -1.409 | -1.294 |
| BXD05 | -0.376 | -0.693 |
| BXD06 | -0.973 | -1.882 |
| BXD07 | -1.338 | -1.536 |
| BXD08 | -1.695 | -1.543 |
| BXD09 | -1.372 | -1.605 |
| CAST | 0.507 | -2.271 |
| CCcont | -0.943 | -0.755 |
| DS01 | 0.464 | -0.501 |
| DS02 | 0.545 | -0.18 |
| DS04 | 0.275 | -0.32 |
| DS0c | 0.859 | 0.096 |
| GP01 | -2.45 | -1.233 |
| GP02 | -2.63 | -2.309 |
| GP0c | -1.015 | -1.553 |
| NOD | 0.433 | -0.241 |
| NZO | 0.585 | -0.238 |
| PWK | 0.618 | 0.473 |
| H37Rv_KO_CtpC | -0.737 | 1.546 |
| H37Rv_KO_CtpD | -0.202 | 2.014 |
| H37Rv_KO_Rv1272 | 1.003 | 1.129 |
| H37Rv_KO_SugABC | -1.786 | 0.483 |
| H37Rv_KO_MbtN | -0.852 | -1.453 |
| Trans05 | 0.514 | 0.541 |
| macrophage_unactivated | -1.042 | 0.391 |
| IL1 | -1.317 | -3.192 |
| Rapamycin | -0.46 | -0.807 |
| Tcell | -1.496 | 0.349 |
| GMCSF | 0.436 | -0.05 |
| IFNab | -0.795 | 0.623 |
| IFNg | 0.337 | 0.842 |
| IFNg_GMCSF1 | 1.603 | 1.304 |
| Rv1432_day32 | 0.0 | -0.927 |
| Rv1565c_day32 | -0.327 | 0.529 |
| secA2_input | -1.791 | -1.185 |
| delta_Rv3594 | -0.376 | -0.421 |
| delta_Rv3717 | -0.019 | -0.761 |
| delta_Rv3811 | -0.758 | 0.846 |
| delta_Rv0954 | -0.397 | -1.627 |
| PonA1 | -2.163 | -4.311 |
| EccD1_KO | 0.46 | 0.161 |
| EspI_KO | 0.522 | 0.094 |
| PE35_KO | 0.837 | 0.19 |
| PPE68_KO | 0.79 | 1.021 |
| glycerol2 | 2.254 | 2.112 |
| lignocerate | 3.177 | 2.79 |
| oleate | -0.105 | -0.94 |
| phosphatidylcholine | 2.724 | 2.357 |
| acetate | 3.607 | 3.91 |
| glucAc | 3.073 | 3.051 |
| Rv0950ko | 2.174 | 1.984 |
| Rv1096ko | 1.167 | 1.448 |
| Rv3684ko | 2.394 | 1.873 |
| delta_otsA_trehalose | 3.412 | -2.384 |