Top 10 genes with highest correlation to Rv2007c/fdxA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.7036) | info on Rv2237A/- |
| Rv1999c/- | (cc=0.6802) | info on Rv1999c/- |
| Rv0379/secE2 | (cc=0.6618) | info on Rv0379/secE2 |
| Rv0089/- | (cc=0.6472) | info on Rv0089/- |
| Rv0008c/- | (cc=0.6455) | info on Rv0008c/- |
| Rv1738/- | (cc=0.6422) | info on Rv1738/- |
| Rv1852/ureG | (cc=0.6385) | info on Rv1852/ureG |
| Rv3354/- | (cc=0.6379) | info on Rv3354/- |
| Rv1880c/cyp140 | (cc=0.6354) | info on Rv1880c/cyp140 |
| Rv2426c/- | (cc=0.6293) | info on Rv2426c/- |
Correlation of Rv2007c/fdxA with Rv1852/ureG
Normalized LFCs for Rv2007c/fdxA:
(description and provenance of datasets)
| Rv2007c/fdxA | Rv1852/ureG | |
| Fe_supp_jason_reseq | -0.204 | -0.595 |
| low_pH_jason_reseq | -1.392 | -1.722 |
| NO_jason_reseq | -0.11 | -0.507 |
| B6_jason_reseq | 1.433 | -2.156 |
| MHCII_jason_reseq | 0.95 | -2.675 |
| Isoniazid02 | 1.404 | 0.416 |
| Rifampicin4 | -0.504 | -0.349 |
| Ethambutol3 | 0.536 | 0.084 |
| Meropenem3 | 0.058 | 0.672 |
| Vancomycin16 | -0.151 | 0.0 |
| Rv2680_day32 | 0.81 | -2.715 |
| H37Rv_KO_MarP | 0.46 | 0.837 |
| hypoxia_3wks | -0.742 | -1.95 |
| hypoxia_6wks | -0.472 | -1.169 |
| glycerol | 0.009 | -0.844 |
| cholesterol | 0.168 | 0.341 |
| AJ | 0.39 | 0.449 |
| Bibs02 | -0.584 | -0.053 |
| Bibs02c | -0.608 | -0.497 |
| BL6 | -0.133 | 0.103 |
| BL6a | -1.979 | -1.808 |
| BXD01 | -0.994 | -1.786 |
| BXD010 | -2.471 | -2.505 |
| BXD011 | -0.939 | -0.67 |
| BXD03 | -1.307 | -0.738 |
| BXD04 | -1.409 | -1.434 |
| BXD05 | -0.376 | -0.359 |
| BXD06 | -0.973 | -1.859 |
| BXD07 | -1.338 | -1.841 |
| BXD08 | -1.695 | -0.832 |
| BXD09 | -1.372 | -1.404 |
| CAST | 0.507 | -0.108 |
| CCcont | -0.943 | -0.829 |
| DS01 | 0.464 | -1.711 |
| DS02 | 0.545 | -0.696 |
| DS04 | 0.275 | -0.637 |
| DS0c | 0.859 | 0.281 |
| GP01 | -2.45 | -1.354 |
| GP02 | -2.63 | -1.057 |
| GP0c | -1.015 | -1.728 |
| NOD | 0.433 | -1.679 |
| NZO | 0.585 | 0.451 |
| PWK | 0.618 | -0.176 |
| H37Rv_KO_CtpC | -0.737 | -1.598 |
| H37Rv_KO_CtpD | -0.202 | 0.105 |
| H37Rv_KO_Rv1272 | 1.003 | 0.293 |
| H37Rv_KO_SugABC | -1.786 | -0.825 |
| H37Rv_KO_MbtN | -0.852 | 0.029 |
| Trans05 | 0.514 | 0.727 |
| macrophage_unactivated | -1.042 | 0.581 |
| IL1 | -1.317 | -0.303 |
| Rapamycin | -0.46 | -0.313 |
| Tcell | -1.496 | -0.583 |
| GMCSF | 0.436 | -0.515 |
| IFNab | -0.795 | 1.016 |
| IFNg | 0.337 | -0.152 |
| IFNg_GMCSF1 | 1.603 | 0.842 |
| Rv1432_day32 | 0.0 | -0.18 |
| Rv1565c_day32 | -0.327 | 0.058 |
| secA2_input | -1.791 | 1.268 |
| delta_Rv3594 | -0.376 | 1.199 |
| delta_Rv3717 | -0.019 | 0.559 |
| delta_Rv3811 | -0.758 | 0.0 |
| delta_Rv0954 | -0.397 | 2.305 |
| PonA1 | -2.163 | -2.069 |
| EccD1_KO | 0.46 | -0.635 |
| EspI_KO | 0.522 | -0.319 |
| PE35_KO | 0.837 | 1.076 |
| PPE68_KO | 0.79 | -0.038 |
| glycerol2 | 2.254 | 3.213 |
| lignocerate | 3.177 | 3.973 |
| oleate | -0.105 | 0.196 |
| phosphatidylcholine | 2.724 | 3.169 |
| acetate | 3.607 | 3.498 |
| glucAc | 3.073 | 3.418 |
| Rv0950ko | 2.174 | -0.151 |
| Rv1096ko | 1.167 | 0.0 |
| Rv3684ko | 2.394 | 0.789 |
| delta_otsA_trehalose | 3.412 | 2.628 |