Top 10 genes with highest correlation to Rv2007c/fdxA:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv2237A/- | (cc=0.7036) | info on Rv2237A/- |
| Rv1999c/- | (cc=0.6802) | info on Rv1999c/- |
| Rv0379/secE2 | (cc=0.6618) | info on Rv0379/secE2 |
| Rv0089/- | (cc=0.6472) | info on Rv0089/- |
| Rv0008c/- | (cc=0.6455) | info on Rv0008c/- |
| Rv1738/- | (cc=0.6422) | info on Rv1738/- |
| Rv1852/ureG | (cc=0.6385) | info on Rv1852/ureG |
| Rv3354/- | (cc=0.6379) | info on Rv3354/- |
| Rv1880c/cyp140 | (cc=0.6354) | info on Rv1880c/cyp140 |
| Rv2426c/- | (cc=0.6293) | info on Rv2426c/- |
Correlation of Rv2007c/fdxA with Rv2237A/-
Normalized LFCs for Rv2007c/fdxA:
(description and provenance of datasets)
| Rv2007c/fdxA | Rv2237A/- | |
| Fe_supp_jason_reseq | -0.204 | 1.1 |
| low_pH_jason_reseq | -1.392 | -0.631 |
| NO_jason_reseq | -0.11 | -0.32 |
| B6_jason_reseq | 1.433 | -0.363 |
| MHCII_jason_reseq | 0.95 | -0.119 |
| Isoniazid02 | 1.404 | 0.362 |
| Rifampicin4 | -0.504 | 0.42 |
| Ethambutol3 | 0.536 | 0.275 |
| Meropenem3 | 0.058 | 1.324 |
| Vancomycin16 | -0.151 | -0.146 |
| Rv2680_day32 | 0.81 | -0.978 |
| H37Rv_KO_MarP | 0.46 | -0.181 |
| hypoxia_3wks | -0.742 | -0.606 |
| hypoxia_6wks | -0.472 | -2.552 |
| glycerol | 0.009 | -0.162 |
| cholesterol | 0.168 | -0.957 |
| AJ | 0.39 | -0.171 |
| Bibs02 | -0.584 | -0.011 |
| Bibs02c | -0.608 | -0.634 |
| BL6 | -0.133 | -1.255 |
| BL6a | -1.979 | -1.158 |
| BXD01 | -0.994 | -2.152 |
| BXD010 | -2.471 | -1.848 |
| BXD011 | -0.939 | -1.339 |
| BXD03 | -1.307 | -1.858 |
| BXD04 | -1.409 | -1.646 |
| BXD05 | -0.376 | -2.148 |
| BXD06 | -0.973 | -1.59 |
| BXD07 | -1.338 | -2.937 |
| BXD08 | -1.695 | -1.02 |
| BXD09 | -1.372 | -1.931 |
| CAST | 0.507 | -1.253 |
| CCcont | -0.943 | -1.09 |
| DS01 | 0.464 | 0.599 |
| DS02 | 0.545 | 0.348 |
| DS04 | 0.275 | 0.046 |
| DS0c | 0.859 | 0.55 |
| GP01 | -2.45 | -2.855 |
| GP02 | -2.63 | -2.261 |
| GP0c | -1.015 | -2.818 |
| NOD | 0.433 | -0.965 |
| NZO | 0.585 | 1.238 |
| PWK | 0.618 | -1.147 |
| H37Rv_KO_CtpC | -0.737 | 0.029 |
| H37Rv_KO_CtpD | -0.202 | 1.152 |
| H37Rv_KO_Rv1272 | 1.003 | -0.671 |
| H37Rv_KO_SugABC | -1.786 | -2.615 |
| H37Rv_KO_MbtN | -0.852 | -1.135 |
| Trans05 | 0.514 | -3.449 |
| macrophage_unactivated | -1.042 | -1.657 |
| IL1 | -1.317 | 0.347 |
| Rapamycin | -0.46 | 1.565 |
| Tcell | -1.496 | -0.081 |
| GMCSF | 0.436 | 0.758 |
| IFNab | -0.795 | -0.635 |
| IFNg | 0.337 | -0.877 |
| IFNg_GMCSF1 | 1.603 | -0.157 |
| Rv1432_day32 | 0.0 | 1.645 |
| Rv1565c_day32 | -0.327 | -0.218 |
| secA2_input | -1.791 | -0.194 |
| delta_Rv3594 | -0.376 | 0.376 |
| delta_Rv3717 | -0.019 | -1.828 |
| delta_Rv3811 | -0.758 | -0.528 |
| delta_Rv0954 | -0.397 | 0.318 |
| PonA1 | -2.163 | -1.895 |
| EccD1_KO | 0.46 | 0.148 |
| EspI_KO | 0.522 | 0.864 |
| PE35_KO | 0.837 | 0.957 |
| PPE68_KO | 0.79 | 1.241 |
| glycerol2 | 2.254 | 3.085 |
| lignocerate | 3.177 | 4.586 |
| oleate | -0.105 | 0.196 |
| phosphatidylcholine | 2.724 | 3.931 |
| acetate | 3.607 | 5.94 |
| glucAc | 3.073 | 4.505 |
| Rv0950ko | 2.174 | 0.1 |
| Rv1096ko | 1.167 | -0.504 |
| Rv3684ko | 2.394 | -1.88 |
| delta_otsA_trehalose | 3.412 | 4.101 |