Top 10 genes with highest correlation to Rv1963c/mce3R:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3557c/- | (cc=0.5889) | info on Rv3557c/- |
| Rv2239c/- | (cc=0.5872) | info on Rv2239c/- |
| Rv1957/- | (cc=0.5783) | info on Rv1957/- |
| Rv1473/- | (cc=0.5761) | info on Rv1473/- |
| Rv2140c/TB18.6 | (cc=0.5606) | info on Rv2140c/TB18.6 |
| Rv3208A/TB9.4 | (cc=0.536) | info on Rv3208A/TB9.4 |
| Rv0767c/- | (cc=0.5342) | info on Rv0767c/- |
| Rv2733c/- | (cc=0.5237) | info on Rv2733c/- |
| Rv0119/fadD7 | (cc=0.5159) | info on Rv0119/fadD7 |
| Rv1956/higA | (cc=0.5075) | info on Rv1956/higA |
Correlation of Rv1963c/mce3R with Rv3208A/TB9.4
Normalized LFCs for Rv1963c/mce3R:
(description and provenance of datasets)
| Rv1963c/mce3R | Rv3208A/TB9.4 | |
| Fe_supp_jason_reseq | -0.74 | 2.398 |
| low_pH_jason_reseq | -0.069 | 0.694 |
| NO_jason_reseq | -0.567 | -0.263 |
| B6_jason_reseq | 0.044 | 1.57 |
| MHCII_jason_reseq | 0.876 | 0.929 |
| Isoniazid02 | -0.514 | -0.518 |
| Rifampicin4 | 1.064 | 0.826 |
| Ethambutol3 | 0.827 | 2.476 |
| Meropenem3 | 0.27 | 0.126 |
| Vancomycin16 | 0.395 | 0.783 |
| Rv2680_day32 | -0.554 | 0.442 |
| H37Rv_KO_MarP | -0.236 | 1.016 |
| hypoxia_3wks | -1.739 | -1.882 |
| hypoxia_6wks | -1.837 | -1.633 |
| glycerol | 0.19 | 0.549 |
| cholesterol | -2.14 | 0.952 |
| AJ | -1.0 | -1.264 |
| Bibs02 | -0.603 | -0.898 |
| Bibs02c | -0.532 | 0.887 |
| BL6 | -1.472 | -0.948 |
| BL6a | -1.274 | 1.267 |
| BXD01 | -2.266 | -0.479 |
| BXD010 | -0.35 | -1.775 |
| BXD011 | -1.445 | -0.226 |
| BXD03 | -1.652 | -1.273 |
| BXD04 | -2.063 | -1.268 |
| BXD05 | -1.706 | -1.38 |
| BXD06 | -1.692 | -0.967 |
| BXD07 | -2.046 | -1.096 |
| BXD08 | -2.219 | -1.688 |
| BXD09 | -0.797 | -1.267 |
| CAST | -2.017 | -1.255 |
| CCcont | 0.322 | 1.69 |
| DS01 | -1.848 | -0.71 |
| DS02 | -1.701 | -0.607 |
| DS04 | -1.148 | -0.76 |
| DS0c | -0.889 | 0.267 |
| GP01 | -1.967 | 0.559 |
| GP02 | -1.582 | -0.603 |
| GP0c | -0.98 | 0.796 |
| NOD | -0.415 | 0.877 |
| NZO | -0.818 | 0.217 |
| PWK | -1.655 | -0.816 |
| H37Rv_KO_CtpC | -1.712 | 0.421 |
| H37Rv_KO_CtpD | -1.437 | 0.509 |
| H37Rv_KO_Rv1272 | -0.907 | 1.508 |
| H37Rv_KO_SugABC | -0.538 | 1.283 |
| H37Rv_KO_MbtN | -0.32 | -1.428 |
| Trans05 | -0.741 | 1.464 |
| macrophage_unactivated | -1.36 | -0.316 |
| IL1 | -1.875 | -2.029 |
| Rapamycin | -2.167 | -0.988 |
| Tcell | -1.613 | -0.215 |
| GMCSF | -1.138 | -0.544 |
| IFNab | -0.29 | -0.2 |
| IFNg | -1.502 | -1.438 |
| IFNg_GMCSF1 | -1.986 | -2.85 |
| Rv1432_day32 | -1.356 | -0.314 |
| Rv1565c_day32 | -1.275 | 2.132 |
| secA2_input | -0.366 | -2.134 |
| delta_Rv3594 | 0.766 | 3.706 |
| delta_Rv3717 | 0.135 | 2.44 |
| delta_Rv3811 | 1.09 | 2.235 |
| delta_Rv0954 | -0.088 | 2.571 |
| PonA1 | 0.171 | 0.794 |
| EccD1_KO | -1.253 | 0.52 |
| EspI_KO | -1.668 | 0.821 |
| PE35_KO | 0.621 | 1.12 |
| PPE68_KO | 0.323 | 2.259 |
| glycerol2 | -1.868 | 3.174 |
| lignocerate | -1.83 | 2.649 |
| oleate | -2.504 | -2.12 |
| phosphatidylcholine | -1.867 | 2.465 |
| acetate | 0.851 | 4.178 |
| glucAc | 0.758 | 3.653 |
| Rv0950ko | -0.172 | -1.167 |
| Rv1096ko | -0.998 | -0.585 |
| Rv3684ko | -0.717 | 0.802 |
| delta_otsA_trehalose | -0.248 | 0.955 |