Top 10 genes with highest correlation to Rv1963c/mce3R:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3557c/- | (cc=0.5889) | info on Rv3557c/- |
| Rv2239c/- | (cc=0.5872) | info on Rv2239c/- |
| Rv1957/- | (cc=0.5783) | info on Rv1957/- |
| Rv1473/- | (cc=0.5761) | info on Rv1473/- |
| Rv2140c/TB18.6 | (cc=0.5606) | info on Rv2140c/TB18.6 |
| Rv3208A/TB9.4 | (cc=0.536) | info on Rv3208A/TB9.4 |
| Rv0767c/- | (cc=0.5342) | info on Rv0767c/- |
| Rv2733c/- | (cc=0.5237) | info on Rv2733c/- |
| Rv0119/fadD7 | (cc=0.5159) | info on Rv0119/fadD7 |
| Rv1956/higA | (cc=0.5075) | info on Rv1956/higA |
Correlation of Rv1963c/mce3R with Rv2140c/TB18.6
Normalized LFCs for Rv1963c/mce3R:
(description and provenance of datasets)
| Rv1963c/mce3R | Rv2140c/TB18.6 | |
| Fe_supp_jason_reseq | -0.74 | 3.198 |
| low_pH_jason_reseq | -0.069 | -0.582 |
| NO_jason_reseq | -0.567 | -1.273 |
| B6_jason_reseq | 0.044 | -0.538 |
| MHCII_jason_reseq | 0.876 | -0.34 |
| Isoniazid02 | -0.514 | -1.739 |
| Rifampicin4 | 1.064 | 2.101 |
| Ethambutol3 | 0.827 | 2.658 |
| Meropenem3 | 0.27 | 1.695 |
| Vancomycin16 | 0.395 | 2.159 |
| Rv2680_day32 | -0.554 | -0.459 |
| H37Rv_KO_MarP | -0.236 | 1.3 |
| hypoxia_3wks | -1.739 | -2.887 |
| hypoxia_6wks | -1.837 | -3.23 |
| glycerol | 0.19 | 1.988 |
| cholesterol | -2.14 | 1.327 |
| AJ | -1.0 | -2.513 |
| Bibs02 | -0.603 | -2.162 |
| Bibs02c | -0.532 | -0.653 |
| BL6 | -1.472 | -2.385 |
| BL6a | -1.274 | -1.502 |
| BXD01 | -2.266 | -2.483 |
| BXD010 | -0.35 | -2.442 |
| BXD011 | -1.445 | -1.803 |
| BXD03 | -1.652 | -2.578 |
| BXD04 | -2.063 | -2.358 |
| BXD05 | -1.706 | -2.31 |
| BXD06 | -1.692 | -2.545 |
| BXD07 | -2.046 | -2.376 |
| BXD08 | -2.219 | -2.536 |
| BXD09 | -0.797 | -2.679 |
| CAST | -2.017 | -3.415 |
| CCcont | 0.322 | 0.991 |
| DS01 | -1.848 | -3.343 |
| DS02 | -1.701 | -4.147 |
| DS04 | -1.148 | -2.624 |
| DS0c | -0.889 | -2.803 |
| GP01 | -1.967 | -1.536 |
| GP02 | -1.582 | -1.586 |
| GP0c | -0.98 | -2.231 |
| NOD | -0.415 | -1.149 |
| NZO | -0.818 | -2.698 |
| PWK | -1.655 | -2.909 |
| H37Rv_KO_CtpC | -1.712 | -2.788 |
| H37Rv_KO_CtpD | -1.437 | -1.878 |
| H37Rv_KO_Rv1272 | -0.907 | -2.689 |
| H37Rv_KO_SugABC | -0.538 | -1.28 |
| H37Rv_KO_MbtN | -0.32 | -1.022 |
| Trans05 | -0.741 | -2.362 |
| macrophage_unactivated | -1.36 | 0.379 |
| IL1 | -1.875 | -0.599 |
| Rapamycin | -2.167 | 0.187 |
| Tcell | -1.613 | -1.421 |
| GMCSF | -1.138 | -1.89 |
| IFNab | -0.29 | 0.363 |
| IFNg | -1.502 | -2.2 |
| IFNg_GMCSF1 | -1.986 | -1.939 |
| Rv1432_day32 | -1.356 | -2.746 |
| Rv1565c_day32 | -1.275 | -2.685 |
| secA2_input | -0.366 | 0.798 |
| delta_Rv3594 | 0.766 | 1.646 |
| delta_Rv3717 | 0.135 | -0.122 |
| delta_Rv3811 | 1.09 | 1.688 |
| delta_Rv0954 | -0.088 | 0.526 |
| PonA1 | 0.171 | -2.238 |
| EccD1_KO | -1.253 | 1.75 |
| EspI_KO | -1.668 | 1.423 |
| PE35_KO | 0.621 | 0.901 |
| PPE68_KO | 0.323 | 2.003 |
| glycerol2 | -1.868 | 1.808 |
| lignocerate | -1.83 | -0.812 |
| oleate | -2.504 | -0.614 |
| phosphatidylcholine | -1.867 | -0.324 |
| acetate | 0.851 | 0.482 |
| glucAc | 0.758 | 0.549 |
| Rv0950ko | -0.172 | 0.47 |
| Rv1096ko | -0.998 | -0.084 |
| Rv3684ko | -0.717 | -0.888 |
| delta_otsA_trehalose | -0.248 | 0.045 |