Top 10 genes with highest correlation to Rv1963c/mce3R:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3557c/- | (cc=0.5889) | info on Rv3557c/- |
| Rv2239c/- | (cc=0.5872) | info on Rv2239c/- |
| Rv1957/- | (cc=0.5783) | info on Rv1957/- |
| Rv1473/- | (cc=0.5761) | info on Rv1473/- |
| Rv2140c/TB18.6 | (cc=0.5606) | info on Rv2140c/TB18.6 |
| Rv3208A/TB9.4 | (cc=0.536) | info on Rv3208A/TB9.4 |
| Rv0767c/- | (cc=0.5342) | info on Rv0767c/- |
| Rv2733c/- | (cc=0.5237) | info on Rv2733c/- |
| Rv0119/fadD7 | (cc=0.5159) | info on Rv0119/fadD7 |
| Rv1956/higA | (cc=0.5075) | info on Rv1956/higA |
Correlation of Rv1963c/mce3R with Rv2239c/-
Normalized LFCs for Rv1963c/mce3R:
(description and provenance of datasets)
| Rv1963c/mce3R | Rv2239c/- | |
| Fe_supp_jason_reseq | -0.74 | 2.262 |
| low_pH_jason_reseq | -0.069 | 0.0 |
| NO_jason_reseq | -0.567 | 0.0 |
| B6_jason_reseq | 0.044 | 0.0 |
| MHCII_jason_reseq | 0.876 | 0.135 |
| Isoniazid02 | -0.514 | -0.851 |
| Rifampicin4 | 1.064 | 1.836 |
| Ethambutol3 | 0.827 | 3.191 |
| Meropenem3 | 0.27 | 2.116 |
| Vancomycin16 | 0.395 | 1.955 |
| Rv2680_day32 | -0.554 | -0.877 |
| H37Rv_KO_MarP | -0.236 | 1.374 |
| hypoxia_3wks | -1.739 | -1.388 |
| hypoxia_6wks | -1.837 | -1.013 |
| glycerol | 0.19 | 2.567 |
| cholesterol | -2.14 | -1.617 |
| AJ | -1.0 | -1.395 |
| Bibs02 | -0.603 | -1.209 |
| Bibs02c | -0.532 | 0.376 |
| BL6 | -1.472 | -1.52 |
| BL6a | -1.274 | -1.31 |
| BXD01 | -2.266 | -1.583 |
| BXD010 | -0.35 | -1.557 |
| BXD011 | -1.445 | -0.694 |
| BXD03 | -1.652 | -1.644 |
| BXD04 | -2.063 | -1.503 |
| BXD05 | -1.706 | -1.636 |
| BXD06 | -1.692 | -1.623 |
| BXD07 | -2.046 | -1.683 |
| BXD08 | -2.219 | -1.617 |
| BXD09 | -0.797 | -1.708 |
| CAST | -2.017 | -1.523 |
| CCcont | 0.322 | 1.614 |
| DS01 | -1.848 | 1.593 |
| DS02 | -1.701 | 0.671 |
| DS04 | -1.148 | 0.944 |
| DS0c | -0.889 | 0.966 |
| GP01 | -1.967 | -1.2 |
| GP02 | -1.582 | -1.011 |
| GP0c | -0.98 | -1.58 |
| NOD | -0.415 | 1.185 |
| NZO | -0.818 | -2.045 |
| PWK | -1.655 | -2.011 |
| H37Rv_KO_CtpC | -1.712 | -1.813 |
| H37Rv_KO_CtpD | -1.437 | 0.228 |
| H37Rv_KO_Rv1272 | -0.907 | -1.574 |
| H37Rv_KO_SugABC | -0.538 | -0.487 |
| H37Rv_KO_MbtN | -0.32 | -1.253 |
| Trans05 | -0.741 | -1.459 |
| macrophage_unactivated | -1.36 | -0.83 |
| IL1 | -1.875 | -0.78 |
| Rapamycin | -2.167 | -0.807 |
| Tcell | -1.613 | -0.411 |
| GMCSF | -1.138 | -0.694 |
| IFNab | -0.29 | -0.795 |
| IFNg | -1.502 | -0.703 |
| IFNg_GMCSF1 | -1.986 | -0.826 |
| Rv1432_day32 | -1.356 | -0.494 |
| Rv1565c_day32 | -1.275 | -0.199 |
| secA2_input | -0.366 | -1.811 |
| delta_Rv3594 | 0.766 | -0.757 |
| delta_Rv3717 | 0.135 | -2.054 |
| delta_Rv3811 | 1.09 | -1.166 |
| delta_Rv0954 | -0.088 | 1.136 |
| PonA1 | 0.171 | 2.873 |
| EccD1_KO | -1.253 | -0.901 |
| EspI_KO | -1.668 | -2.547 |
| PE35_KO | 0.621 | 3.34 |
| PPE68_KO | 0.323 | 4.012 |
| glycerol2 | -1.868 | 0.241 |
| lignocerate | -1.83 | -1.695 |
| oleate | -2.504 | -3.57 |
| phosphatidylcholine | -1.867 | -1.788 |
| acetate | 0.851 | 1.179 |
| glucAc | 0.758 | 1.925 |
| Rv0950ko | -0.172 | -2.081 |
| Rv1096ko | -0.998 | -1.984 |
| Rv3684ko | -0.717 | -0.642 |
| delta_otsA_trehalose | -0.248 | 2.308 |