Top 10 genes with highest correlation to Rv1963c/mce3R:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv3557c/- | (cc=0.5889) | info on Rv3557c/- |
| Rv2239c/- | (cc=0.5872) | info on Rv2239c/- |
| Rv1957/- | (cc=0.5783) | info on Rv1957/- |
| Rv1473/- | (cc=0.5761) | info on Rv1473/- |
| Rv2140c/TB18.6 | (cc=0.5606) | info on Rv2140c/TB18.6 |
| Rv3208A/TB9.4 | (cc=0.536) | info on Rv3208A/TB9.4 |
| Rv0767c/- | (cc=0.5342) | info on Rv0767c/- |
| Rv2733c/- | (cc=0.5237) | info on Rv2733c/- |
| Rv0119/fadD7 | (cc=0.5159) | info on Rv0119/fadD7 |
| Rv1956/higA | (cc=0.5075) | info on Rv1956/higA |
Correlation of Rv1963c/mce3R with Rv1473/-
Normalized LFCs for Rv1963c/mce3R:
(description and provenance of datasets)
| Rv1963c/mce3R | Rv1473/- | |
| Fe_supp_jason_reseq | -0.74 | 1.664 |
| low_pH_jason_reseq | -0.069 | 0.179 |
| NO_jason_reseq | -0.567 | 0.281 |
| B6_jason_reseq | 0.044 | -0.421 |
| MHCII_jason_reseq | 0.876 | 1.03 |
| Isoniazid02 | -0.514 | -0.141 |
| Rifampicin4 | 1.064 | 0.141 |
| Ethambutol3 | 0.827 | 0.353 |
| Meropenem3 | 0.27 | 0.545 |
| Vancomycin16 | 0.395 | 0.403 |
| Rv2680_day32 | -0.554 | 1.437 |
| H37Rv_KO_MarP | -0.236 | -0.313 |
| hypoxia_3wks | -1.739 | -1.132 |
| hypoxia_6wks | -1.837 | -2.088 |
| glycerol | 0.19 | 2.61 |
| cholesterol | -2.14 | 0.871 |
| AJ | -1.0 | -1.55 |
| Bibs02 | -0.603 | -0.167 |
| Bibs02c | -0.532 | 0.674 |
| BL6 | -1.472 | -1.06 |
| BL6a | -1.274 | 0.057 |
| BXD01 | -2.266 | -1.386 |
| BXD010 | -0.35 | -1.363 |
| BXD011 | -1.445 | -1.165 |
| BXD03 | -1.652 | -1.553 |
| BXD04 | -2.063 | -1.316 |
| BXD05 | -1.706 | -1.055 |
| BXD06 | -1.692 | -1.221 |
| BXD07 | -2.046 | -1.174 |
| BXD08 | -2.219 | -1.527 |
| BXD09 | -0.797 | -1.286 |
| CAST | -2.017 | -1.952 |
| CCcont | 0.322 | 1.227 |
| DS01 | -1.848 | -0.14 |
| DS02 | -1.701 | -1.226 |
| DS04 | -1.148 | -1.192 |
| DS0c | -0.889 | -0.064 |
| GP01 | -1.967 | 0.811 |
| GP02 | -1.582 | -0.603 |
| GP0c | -0.98 | -0.391 |
| NOD | -0.415 | -1.38 |
| NZO | -0.818 | -1.825 |
| PWK | -1.655 | -2.087 |
| H37Rv_KO_CtpC | -1.712 | -0.835 |
| H37Rv_KO_CtpD | -1.437 | 0.173 |
| H37Rv_KO_Rv1272 | -0.907 | -0.942 |
| H37Rv_KO_SugABC | -0.538 | 1.128 |
| H37Rv_KO_MbtN | -0.32 | 0.086 |
| Trans05 | -0.741 | -0.803 |
| macrophage_unactivated | -1.36 | 0.802 |
| IL1 | -1.875 | -1.344 |
| Rapamycin | -2.167 | -0.175 |
| Tcell | -1.613 | -1.004 |
| GMCSF | -1.138 | -0.15 |
| IFNab | -0.29 | -0.348 |
| IFNg | -1.502 | -1.638 |
| IFNg_GMCSF1 | -1.986 | -0.757 |
| Rv1432_day32 | -1.356 | 0.992 |
| Rv1565c_day32 | -1.275 | 1.515 |
| secA2_input | -0.366 | 1.623 |
| delta_Rv3594 | 0.766 | 2.688 |
| delta_Rv3717 | 0.135 | 0.82 |
| delta_Rv3811 | 1.09 | 2.104 |
| delta_Rv0954 | -0.088 | 1.005 |
| PonA1 | 0.171 | 1.445 |
| EccD1_KO | -1.253 | 0.539 |
| EspI_KO | -1.668 | 1.474 |
| PE35_KO | 0.621 | 1.193 |
| PPE68_KO | 0.323 | 1.6 |
| glycerol2 | -1.868 | -0.615 |
| lignocerate | -1.83 | -0.785 |
| oleate | -2.504 | -1.195 |
| phosphatidylcholine | -1.867 | -0.803 |
| acetate | 0.851 | 0.527 |
| glucAc | 0.758 | 0.707 |
| Rv0950ko | -0.172 | -0.932 |
| Rv1096ko | -0.998 | -1.559 |
| Rv3684ko | -0.717 | -1.228 |
| delta_otsA_trehalose | -0.248 | 1.844 |