Top 10 genes with highest correlation to Rv1927/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0264c/- | (cc=0.5501) | info on Rv0264c/- |
| Rv0278c/PE_PGRS3 | (cc=0.5241) | info on Rv0278c/PE_PGRS3 |
| Rv2577/- | (cc=0.5225) | info on Rv2577/- |
| Rv2638/- | (cc=0.5099) | info on Rv2638/- |
| Rv1425/- | (cc=0.5068) | info on Rv1425/- |
| Rv0964c/- | (cc=0.5021) | info on Rv0964c/- |
| Rv0536/galE3 | (cc=0.4996) | info on Rv0536/galE3 |
| Rv1999c/- | (cc=0.496) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.4907) | info on Rv2687c/- |
| Rv0870c/- | (cc=0.4903) | info on Rv0870c/- |
Correlation of Rv1927/- with Rv2638/-
Normalized LFCs for Rv1927/-:
(description and provenance of datasets)
| Rv1927/- | Rv2638/- | |
| Fe_supp_jason_reseq | 0.009 | -0.785 |
| low_pH_jason_reseq | -0.458 | 0.512 |
| NO_jason_reseq | 0.097 | 0.719 |
| B6_jason_reseq | 0.397 | 0.607 |
| MHCII_jason_reseq | 0.468 | 1.199 |
| Isoniazid02 | -0.154 | -0.137 |
| Rifampicin4 | 0.311 | 0.279 |
| Ethambutol3 | 0.044 | -0.146 |
| Meropenem3 | 0.119 | -0.06 |
| Vancomycin16 | 1.053 | 0.042 |
| Rv2680_day32 | 0.472 | 0.944 |
| H37Rv_KO_MarP | -0.161 | -0.045 |
| hypoxia_3wks | -0.179 | -0.55 |
| hypoxia_6wks | -0.599 | 1.28 |
| glycerol | 0.009 | -0.102 |
| cholesterol | -0.09 | 0.163 |
| AJ | 0.429 | 0.091 |
| Bibs02 | 0.878 | -0.056 |
| Bibs02c | 0.194 | 0.061 |
| BL6 | -0.219 | 0.021 |
| BL6a | -0.319 | -0.913 |
| BXD01 | -0.359 | -1.3 |
| BXD010 | 0.114 | -0.34 |
| BXD011 | 0.141 | -2.215 |
| BXD03 | -0.554 | -1.293 |
| BXD04 | -0.408 | 0.099 |
| BXD05 | -0.504 | -0.989 |
| BXD06 | -0.039 | -1.212 |
| BXD07 | -0.661 | -1.905 |
| BXD08 | -0.826 | -1.813 |
| BXD09 | -0.294 | -0.932 |
| CAST | 0.073 | -0.701 |
| CCcont | -0.226 | -0.883 |
| DS01 | 0.38 | 0.272 |
| DS02 | 0.38 | -0.925 |
| DS04 | 0.024 | 0.824 |
| DS0c | 0.185 | 0.118 |
| GP01 | -0.226 | -0.313 |
| GP02 | 1.457 | 0.429 |
| GP0c | -0.197 | 1.536 |
| NOD | -0.218 | -0.122 |
| NZO | 0.561 | 0.842 |
| PWK | 0.774 | -0.597 |
| H37Rv_KO_CtpC | -0.38 | -0.357 |
| H37Rv_KO_CtpD | -0.342 | -0.33 |
| H37Rv_KO_Rv1272 | 0.371 | -1.469 |
| H37Rv_KO_SugABC | -0.512 | -1.338 |
| H37Rv_KO_MbtN | -0.993 | -0.865 |
| Trans05 | 0.318 | -1.674 |
| macrophage_unactivated | -0.297 | -0.568 |
| IL1 | 0.282 | -1.201 |
| Rapamycin | -0.025 | -1.182 |
| Tcell | 0.049 | -0.968 |
| GMCSF | -0.38 | -1.096 |
| IFNab | 0.136 | -0.928 |
| IFNg | 0.275 | -0.871 |
| IFNg_GMCSF1 | -0.321 | -1.436 |
| Rv1432_day32 | 1.199 | 0.495 |
| Rv1565c_day32 | 0.046 | -0.648 |
| secA2_input | -0.466 | -0.291 |
| delta_Rv3594 | -0.624 | -1.309 |
| delta_Rv3717 | 0.345 | 0.204 |
| delta_Rv3811 | 0.283 | -0.373 |
| delta_Rv0954 | -0.397 | 0.349 |
| PonA1 | -0.278 | -0.193 |
| EccD1_KO | 0.0 | 0.181 |
| EspI_KO | -0.539 | -0.853 |
| PE35_KO | 0.429 | -0.49 |
| PPE68_KO | 0.035 | -0.403 |
| glycerol2 | 1.146 | 2.169 |
| lignocerate | 0.95 | 2.979 |
| oleate | 0.509 | -0.658 |
| phosphatidylcholine | 1.305 | 2.657 |
| acetate | 0.387 | 2.675 |
| glucAc | 1.034 | 2.4 |
| Rv0950ko | 0.109 | 1.396 |
| Rv1096ko | 0.109 | 0.67 |
| Rv3684ko | -0.102 | 0.508 |
| delta_otsA_trehalose | -0.202 | -0.228 |