Top 10 genes with highest correlation to Rv1927/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0264c/- | (cc=0.5501) | info on Rv0264c/- |
| Rv0278c/PE_PGRS3 | (cc=0.5241) | info on Rv0278c/PE_PGRS3 |
| Rv2577/- | (cc=0.5225) | info on Rv2577/- |
| Rv2638/- | (cc=0.5099) | info on Rv2638/- |
| Rv1425/- | (cc=0.5068) | info on Rv1425/- |
| Rv0964c/- | (cc=0.5021) | info on Rv0964c/- |
| Rv0536/galE3 | (cc=0.4996) | info on Rv0536/galE3 |
| Rv1999c/- | (cc=0.496) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.4907) | info on Rv2687c/- |
| Rv0870c/- | (cc=0.4903) | info on Rv0870c/- |
Correlation of Rv1927/- with Rv0278c/PE_PGRS3
Normalized LFCs for Rv1927/-:
(description and provenance of datasets)
| Rv1927/- | Rv0278c/PE_PGRS3 | |
| Fe_supp_jason_reseq | 0.009 | -0.425 |
| low_pH_jason_reseq | -0.458 | -0.853 |
| NO_jason_reseq | 0.097 | -0.249 |
| B6_jason_reseq | 0.397 | -0.18 |
| MHCII_jason_reseq | 0.468 | 0.931 |
| Isoniazid02 | -0.154 | -0.119 |
| Rifampicin4 | 0.311 | 0.412 |
| Ethambutol3 | 0.044 | 0.711 |
| Meropenem3 | 0.119 | 1.444 |
| Vancomycin16 | 1.053 | 0.0 |
| Rv2680_day32 | 0.472 | 0.83 |
| H37Rv_KO_MarP | -0.161 | 0.416 |
| hypoxia_3wks | -0.179 | -0.427 |
| hypoxia_6wks | -0.599 | -0.223 |
| glycerol | 0.009 | 1.118 |
| cholesterol | -0.09 | 1.118 |
| AJ | 0.429 | 0.341 |
| Bibs02 | 0.878 | 1.095 |
| Bibs02c | 0.194 | 0.041 |
| BL6 | -0.219 | -0.701 |
| BL6a | -0.319 | -1.045 |
| BXD01 | -0.359 | -0.192 |
| BXD010 | 0.114 | -0.594 |
| BXD011 | 0.141 | -0.553 |
| BXD03 | -0.554 | -0.902 |
| BXD04 | -0.408 | -1.024 |
| BXD05 | -0.504 | -0.544 |
| BXD06 | -0.039 | -1.105 |
| BXD07 | -0.661 | -0.269 |
| BXD08 | -0.826 | -0.197 |
| BXD09 | -0.294 | -0.342 |
| CAST | 0.073 | -0.045 |
| CCcont | -0.226 | -0.122 |
| DS01 | 0.38 | -0.144 |
| DS02 | 0.38 | 0.759 |
| DS04 | 0.024 | 0.382 |
| DS0c | 0.185 | -0.178 |
| GP01 | -0.226 | 0.852 |
| GP02 | 1.457 | 0.732 |
| GP0c | -0.197 | 0.169 |
| NOD | -0.218 | -0.602 |
| NZO | 0.561 | -0.039 |
| PWK | 0.774 | 0.185 |
| H37Rv_KO_CtpC | -0.38 | -0.705 |
| H37Rv_KO_CtpD | -0.342 | -0.077 |
| H37Rv_KO_Rv1272 | 0.371 | 0.081 |
| H37Rv_KO_SugABC | -0.512 | 0.146 |
| H37Rv_KO_MbtN | -0.993 | -0.578 |
| Trans05 | 0.318 | 0.723 |
| macrophage_unactivated | -0.297 | -0.211 |
| IL1 | 0.282 | -1.783 |
| Rapamycin | -0.025 | -1.013 |
| Tcell | 0.049 | -1.075 |
| GMCSF | -0.38 | -0.982 |
| IFNab | 0.136 | -0.998 |
| IFNg | 0.275 | -0.882 |
| IFNg_GMCSF1 | -0.321 | -0.211 |
| Rv1432_day32 | 1.199 | 0.24 |
| Rv1565c_day32 | 0.046 | -0.622 |
| secA2_input | -0.466 | -0.028 |
| delta_Rv3594 | -0.624 | 0.02 |
| delta_Rv3717 | 0.345 | 0.156 |
| delta_Rv3811 | 0.283 | -0.498 |
| delta_Rv0954 | -0.397 | -0.634 |
| PonA1 | -0.278 | 0.479 |
| EccD1_KO | 0.0 | 0.095 |
| EspI_KO | -0.539 | 0.442 |
| PE35_KO | 0.429 | 0.213 |
| PPE68_KO | 0.035 | 0.234 |
| glycerol2 | 1.146 | 2.123 |
| lignocerate | 0.95 | 2.776 |
| oleate | 0.509 | 0.0 |
| phosphatidylcholine | 1.305 | 2.122 |
| acetate | 0.387 | 3.238 |
| glucAc | 1.034 | 2.725 |
| Rv0950ko | 0.109 | 0.0 |
| Rv1096ko | 0.109 | 0.247 |
| Rv3684ko | -0.102 | -0.111 |
| delta_otsA_trehalose | -0.202 | -1.199 |