Top 10 genes with highest correlation to Rv1927/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0264c/- | (cc=0.5501) | info on Rv0264c/- |
| Rv0278c/PE_PGRS3 | (cc=0.5241) | info on Rv0278c/PE_PGRS3 |
| Rv2577/- | (cc=0.5225) | info on Rv2577/- |
| Rv2638/- | (cc=0.5099) | info on Rv2638/- |
| Rv1425/- | (cc=0.5068) | info on Rv1425/- |
| Rv0964c/- | (cc=0.5021) | info on Rv0964c/- |
| Rv0536/galE3 | (cc=0.4996) | info on Rv0536/galE3 |
| Rv1999c/- | (cc=0.496) | info on Rv1999c/- |
| Rv2687c/- | (cc=0.4907) | info on Rv2687c/- |
| Rv0870c/- | (cc=0.4903) | info on Rv0870c/- |
Correlation of Rv1927/- with Rv0964c/-
Normalized LFCs for Rv1927/-:
(description and provenance of datasets)
| Rv1927/- | Rv0964c/- | |
| Fe_supp_jason_reseq | 0.009 | -2.796 |
| low_pH_jason_reseq | -0.458 | 0.524 |
| NO_jason_reseq | 0.097 | -0.953 |
| B6_jason_reseq | 0.397 | 0.912 |
| MHCII_jason_reseq | 0.468 | 0.963 |
| Isoniazid02 | -0.154 | 0.242 |
| Rifampicin4 | 0.311 | 0.663 |
| Ethambutol3 | 0.044 | -0.303 |
| Meropenem3 | 0.119 | -0.277 |
| Vancomycin16 | 1.053 | 0.366 |
| Rv2680_day32 | 0.472 | -0.423 |
| H37Rv_KO_MarP | -0.161 | -0.085 |
| hypoxia_3wks | -0.179 | 0.0 |
| hypoxia_6wks | -0.599 | 0.699 |
| glycerol | 0.009 | -0.149 |
| cholesterol | -0.09 | -0.378 |
| AJ | 0.429 | -0.619 |
| Bibs02 | 0.878 | 0.461 |
| Bibs02c | 0.194 | 0.249 |
| BL6 | -0.219 | -0.242 |
| BL6a | -0.319 | -0.815 |
| BXD01 | -0.359 | -1.849 |
| BXD010 | 0.114 | -2.665 |
| BXD011 | 0.141 | -1.69 |
| BXD03 | -0.554 | 0.14 |
| BXD04 | -0.408 | -1.484 |
| BXD05 | -0.504 | -2.345 |
| BXD06 | -0.039 | -1.655 |
| BXD07 | -0.661 | -1.183 |
| BXD08 | -0.826 | -1.414 |
| BXD09 | -0.294 | -1.783 |
| CAST | 0.073 | 1.098 |
| CCcont | -0.226 | -0.802 |
| DS01 | 0.38 | 0.739 |
| DS02 | 0.38 | 0.707 |
| DS04 | 0.024 | 0.802 |
| DS0c | 0.185 | 0.33 |
| GP01 | -0.226 | -0.176 |
| GP02 | 1.457 | -0.148 |
| GP0c | -0.197 | 0.267 |
| NOD | -0.218 | 0.399 |
| NZO | 0.561 | -0.63 |
| PWK | 0.774 | 0.081 |
| H37Rv_KO_CtpC | -0.38 | -2.904 |
| H37Rv_KO_CtpD | -0.342 | 0.829 |
| H37Rv_KO_Rv1272 | 0.371 | -1.711 |
| H37Rv_KO_SugABC | -0.512 | -0.634 |
| H37Rv_KO_MbtN | -0.993 | -1.751 |
| Trans05 | 0.318 | -1.834 |
| macrophage_unactivated | -0.297 | -0.275 |
| IL1 | 0.282 | 0.092 |
| Rapamycin | -0.025 | 0.095 |
| Tcell | 0.049 | 0.365 |
| GMCSF | -0.38 | 0.689 |
| IFNab | 0.136 | -1.046 |
| IFNg | 0.275 | -0.452 |
| IFNg_GMCSF1 | -0.321 | -0.035 |
| Rv1432_day32 | 1.199 | 1.55 |
| Rv1565c_day32 | 0.046 | -2.41 |
| secA2_input | -0.466 | 0.388 |
| delta_Rv3594 | -0.624 | -0.203 |
| delta_Rv3717 | 0.345 | -0.321 |
| delta_Rv3811 | 0.283 | -1.02 |
| delta_Rv0954 | -0.397 | -1.344 |
| PonA1 | -0.278 | -0.756 |
| EccD1_KO | 0.0 | 0.52 |
| EspI_KO | -0.539 | -0.508 |
| PE35_KO | 0.429 | 1.088 |
| PPE68_KO | 0.035 | 1.657 |
| glycerol2 | 1.146 | 2.826 |
| lignocerate | 0.95 | 3.942 |
| oleate | 0.509 | 1.969 |
| phosphatidylcholine | 1.305 | 3.419 |
| acetate | 0.387 | 4.683 |
| glucAc | 1.034 | 3.524 |
| Rv0950ko | 0.109 | -0.178 |
| Rv1096ko | 0.109 | -0.458 |
| Rv3684ko | -0.102 | -0.786 |
| delta_otsA_trehalose | -0.202 | -0.415 |