Top 10 genes with highest correlation to Rv1927/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0264c/- | (cc=0.5501) | info on Rv0264c/- |
Rv0278c/PE_PGRS3 | (cc=0.5241) | info on Rv0278c/PE_PGRS3 |
Rv2577/- | (cc=0.5225) | info on Rv2577/- |
Rv2638/- | (cc=0.5099) | info on Rv2638/- |
Rv1425/- | (cc=0.5068) | info on Rv1425/- |
Rv0964c/- | (cc=0.5021) | info on Rv0964c/- |
Rv0536/galE3 | (cc=0.4996) | info on Rv0536/galE3 |
Rv1999c/- | (cc=0.496) | info on Rv1999c/- |
Rv2687c/- | (cc=0.4907) | info on Rv2687c/- |
Rv0870c/- | (cc=0.4903) | info on Rv0870c/- |
Correlation of Rv1927/- with Rv1425/-
Normalized LFCs for Rv1927/-:
(description and provenance of datasets)
Rv1927/- | Rv1425/- | |
Fe_supp_jason_reseq | 0.009 | 0.054 |
low_pH_jason_reseq | -0.458 | -0.119 |
NO_jason_reseq | 0.097 | -0.168 |
B6_jason_reseq | 0.397 | 0.634 |
MHCII_jason_reseq | 0.468 | 0.73 |
Isoniazid02 | -0.154 | 1.234 |
Rifampicin4 | 0.311 | -0.087 |
Ethambutol3 | 0.044 | 0.061 |
Meropenem3 | 0.119 | 0.817 |
Vancomycin16 | 1.053 | 0.085 |
Rv2680_day32 | 0.472 | 0.043 |
H37Rv_KO_MarP | -0.161 | 0.236 |
hypoxia_3wks | -0.179 | -0.263 |
hypoxia_6wks | -0.599 | -0.56 |
glycerol | 0.009 | -0.591 |
cholesterol | -0.09 | 0.012 |
AJ | 0.429 | 0.123 |
Bibs02 | 0.878 | -0.11 |
Bibs02c | 0.194 | -0.27 |
BL6 | -0.219 | -0.246 |
BL6a | -0.319 | -0.775 |
BXD01 | -0.359 | 0.297 |
BXD010 | 0.114 | -0.432 |
BXD011 | 0.141 | -0.176 |
BXD03 | -0.554 | -0.488 |
BXD04 | -0.408 | 0.021 |
BXD05 | -0.504 | -0.328 |
BXD06 | -0.039 | 0.039 |
BXD07 | -0.661 | -0.152 |
BXD08 | -0.826 | 0.163 |
BXD09 | -0.294 | -0.395 |
CAST | 0.073 | -0.489 |
CCcont | -0.226 | -0.25 |
DS01 | 0.38 | 0.05 |
DS02 | 0.38 | 0.46 |
DS04 | 0.024 | 0.416 |
DS0c | 0.185 | 0.09 |
GP01 | -0.226 | -0.038 |
GP02 | 1.457 | 1.025 |
GP0c | -0.197 | -0.199 |
NOD | -0.218 | 0.163 |
NZO | 0.561 | 0.295 |
PWK | 0.774 | 0.276 |
H37Rv_KO_CtpC | -0.38 | -0.328 |
H37Rv_KO_CtpD | -0.342 | 0.169 |
H37Rv_KO_Rv1272 | 0.371 | 0.747 |
H37Rv_KO_SugABC | -0.512 | -0.2 |
H37Rv_KO_MbtN | -0.993 | -0.224 |
Trans05 | 0.318 | 0.532 |
macrophage_unactivated | -0.297 | -0.107 |
IL1 | 0.282 | -0.05 |
Rapamycin | -0.025 | 0.276 |
Tcell | 0.049 | -0.14 |
GMCSF | -0.38 | 0.045 |
IFNab | 0.136 | -0.348 |
IFNg | 0.275 | -0.233 |
IFNg_GMCSF1 | -0.321 | -0.135 |
Rv1432_day32 | 1.199 | 0.0 |
Rv1565c_day32 | 0.046 | 0.377 |
secA2_input | -0.466 | -0.027 |
delta_Rv3594 | -0.624 | -0.119 |
delta_Rv3717 | 0.345 | -0.395 |
delta_Rv3811 | 0.283 | -0.412 |
delta_Rv0954 | -0.397 | 0.58 |
PonA1 | -0.278 | -0.488 |
EccD1_KO | 0.0 | -0.526 |
EspI_KO | -0.539 | -0.753 |
PE35_KO | 0.429 | -0.312 |
PPE68_KO | 0.035 | -1.008 |
glycerol2 | 1.146 | 0.996 |
lignocerate | 0.95 | 1.223 |
oleate | 0.509 | 0.896 |
phosphatidylcholine | 1.305 | 1.389 |
acetate | 0.387 | 0.68 |
glucAc | 1.034 | 0.474 |
Rv0950ko | 0.109 | -0.277 |
Rv1096ko | 0.109 | -0.229 |
Rv3684ko | -0.102 | -0.098 |
delta_otsA_trehalose | -0.202 | -0.628 |