Top 10 genes with highest correlation to Rv1906c/-:
update plot | correlation | link to info on gene |
---|---|---|
Rv0499/- | (cc=0.4999) | info on Rv0499/- |
Rv0450c/mmpL4 | (cc=0.4369) | info on Rv0450c/mmpL4 |
Rv3650/PE33 | (cc=0.418) | info on Rv3650/PE33 |
Rv2067c/- | (cc=0.4039) | info on Rv2067c/- |
Rv2851c/- | (cc=0.3911) | info on Rv2851c/- |
Rv0451c/mmpS4 | (cc=0.3736) | info on Rv0451c/mmpS4 |
Rv3501c/yrbE4A | (cc=0.3712) | info on Rv3501c/yrbE4A |
Rv2836c/dinF | (cc=0.3626) | info on Rv2836c/dinF |
Rv2686c/- | (cc=0.3542) | info on Rv2686c/- |
Rv3526/kshA | (cc=0.3518) | info on Rv3526/kshA |
Correlation of Rv1906c/- with Rv3650/PE33
Normalized LFCs for Rv1906c/-:
(description and provenance of datasets)
Rv1906c/- | Rv3650/PE33 | |
Fe_supp_jason_reseq | -0.466 | 3.01 |
low_pH_jason_reseq | -0.734 | 2.212 |
NO_jason_reseq | -0.499 | -1.78 |
B6_jason_reseq | -1.742 | -0.214 |
MHCII_jason_reseq | -0.967 | -0.663 |
Isoniazid02 | 0.004 | 1.394 |
Rifampicin4 | 0.444 | 0.812 |
Ethambutol3 | -1.502 | -0.14 |
Meropenem3 | 0.329 | 0.386 |
Vancomycin16 | -1.0 | 0.971 |
Rv2680_day32 | -1.235 | 0.803 |
H37Rv_KO_MarP | -0.713 | 0.147 |
hypoxia_3wks | -0.754 | 1.029 |
hypoxia_6wks | -0.491 | 1.777 |
glycerol | -0.222 | -0.554 |
cholesterol | -2.549 | -0.398 |
AJ | -1.277 | -0.637 |
Bibs02 | 0.57 | 1.249 |
Bibs02c | -0.265 | -0.174 |
BL6 | -1.167 | 1.909 |
BL6a | -0.263 | 2.986 |
BXD01 | -1.348 | 3.607 |
BXD010 | -0.514 | 1.662 |
BXD011 | -0.649 | 2.278 |
BXD03 | -0.485 | 1.623 |
BXD04 | -0.044 | 4.115 |
BXD05 | 0.354 | 3.431 |
BXD06 | -0.379 | 2.714 |
BXD07 | -1.195 | 3.558 |
BXD08 | -0.837 | 3.925 |
BXD09 | -1.032 | 3.04 |
CAST | -0.843 | 0.501 |
CCcont | 0.909 | 2.967 |
DS01 | -0.797 | 0.0 |
DS02 | -0.618 | 1.976 |
DS04 | -1.504 | -0.533 |
DS0c | -0.547 | -0.379 |
GP01 | 0.103 | 0.444 |
GP02 | -0.766 | 2.625 |
GP0c | 0.559 | 0.888 |
NOD | -0.885 | -0.617 |
NZO | -1.049 | -0.548 |
PWK | -0.205 | -0.539 |
H37Rv_KO_CtpC | -0.39 | 2.905 |
H37Rv_KO_CtpD | -2.039 | 1.193 |
H37Rv_KO_Rv1272 | -0.338 | -0.117 |
H37Rv_KO_SugABC | -1.445 | -0.272 |
H37Rv_KO_MbtN | 1.124 | 5.572 |
Trans05 | -0.329 | 3.09 |
macrophage_unactivated | -0.625 | 0.77 |
IL1 | 0.16 | 0.955 |
Rapamycin | 0.546 | 4.195 |
Tcell | -0.336 | 1.147 |
GMCSF | -1.217 | -0.9 |
IFNab | -0.738 | 1.451 |
IFNg | -0.275 | 4.918 |
IFNg_GMCSF1 | 0.094 | 0.346 |
Rv1432_day32 | -2.468 | -2.639 |
Rv1565c_day32 | -1.638 | -1.651 |
secA2_input | -1.628 | -1.722 |
delta_Rv3594 | -1.121 | 4.006 |
delta_Rv3717 | -0.905 | 2.037 |
delta_Rv3811 | -0.48 | 2.687 |
delta_Rv0954 | -0.404 | 1.862 |
PonA1 | -0.526 | -0.56 |
EccD1_KO | -0.885 | -2.983 |
EspI_KO | 0.094 | -0.773 |
PE35_KO | -1.138 | -3.661 |
PPE68_KO | -1.558 | -2.902 |
glycerol2 | 0.415 | 2.036 |
lignocerate | 0.368 | 1.867 |
oleate | -3.413 | -1.117 |
phosphatidylcholine | 0.819 | 0.854 |
acetate | -0.175 | 2.986 |
glucAc | -0.624 | 2.521 |
Rv0950ko | -0.214 | -2.844 |
Rv1096ko | -1.704 | -0.492 |
Rv3684ko | -1.998 | -0.462 |
delta_otsA_trehalose | 0.264 | 0.75 |