Top 10 genes with highest correlation to Rv1906c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0499/- | (cc=0.4999) | info on Rv0499/- |
| Rv0450c/mmpL4 | (cc=0.4369) | info on Rv0450c/mmpL4 |
| Rv3650/PE33 | (cc=0.418) | info on Rv3650/PE33 |
| Rv2067c/- | (cc=0.4039) | info on Rv2067c/- |
| Rv2851c/- | (cc=0.3911) | info on Rv2851c/- |
| Rv0451c/mmpS4 | (cc=0.3736) | info on Rv0451c/mmpS4 |
| Rv3501c/yrbE4A | (cc=0.3712) | info on Rv3501c/yrbE4A |
| Rv2836c/dinF | (cc=0.3626) | info on Rv2836c/dinF |
| Rv2686c/- | (cc=0.3542) | info on Rv2686c/- |
| Rv3526/kshA | (cc=0.3518) | info on Rv3526/kshA |
Correlation of Rv1906c/- with Rv0451c/mmpS4
Normalized LFCs for Rv1906c/-:
(description and provenance of datasets)
| Rv1906c/- | Rv0451c/mmpS4 | |
| Fe_supp_jason_reseq | -0.466 | 2.177 |
| low_pH_jason_reseq | -0.734 | -1.35 |
| NO_jason_reseq | -0.499 | -3.471 |
| B6_jason_reseq | -1.742 | -1.356 |
| MHCII_jason_reseq | -0.967 | -1.292 |
| Isoniazid02 | 0.004 | -2.923 |
| Rifampicin4 | 0.444 | 0.579 |
| Ethambutol3 | -1.502 | -3.499 |
| Meropenem3 | 0.329 | -0.326 |
| Vancomycin16 | -1.0 | -1.005 |
| Rv2680_day32 | -1.235 | -3.287 |
| H37Rv_KO_MarP | -0.713 | -0.883 |
| hypoxia_3wks | -0.754 | -0.829 |
| hypoxia_6wks | -0.491 | -0.706 |
| glycerol | -0.222 | -1.369 |
| cholesterol | -2.549 | -2.098 |
| AJ | -1.277 | -2.306 |
| Bibs02 | 0.57 | -1.507 |
| Bibs02c | -0.265 | -0.629 |
| BL6 | -1.167 | -0.639 |
| BL6a | -0.263 | -0.359 |
| BXD01 | -1.348 | -1.768 |
| BXD010 | -0.514 | -0.704 |
| BXD011 | -0.649 | -0.923 |
| BXD03 | -0.485 | -0.691 |
| BXD04 | -0.044 | 0.139 |
| BXD05 | 0.354 | -1.182 |
| BXD06 | -0.379 | -0.734 |
| BXD07 | -1.195 | -2.006 |
| BXD08 | -0.837 | -1.496 |
| BXD09 | -1.032 | -1.158 |
| CAST | -0.843 | -2.022 |
| CCcont | 0.909 | 0.932 |
| DS01 | -0.797 | -0.946 |
| DS02 | -0.618 | -2.299 |
| DS04 | -1.504 | -2.472 |
| DS0c | -0.547 | -0.652 |
| GP01 | 0.103 | -0.024 |
| GP02 | -0.766 | -0.879 |
| GP0c | 0.559 | -0.769 |
| NOD | -0.885 | -2.374 |
| NZO | -1.049 | -1.982 |
| PWK | -0.205 | -0.59 |
| H37Rv_KO_CtpC | -0.39 | -1.615 |
| H37Rv_KO_CtpD | -2.039 | 0.295 |
| H37Rv_KO_Rv1272 | -0.338 | 0.381 |
| H37Rv_KO_SugABC | -1.445 | 0.068 |
| H37Rv_KO_MbtN | 1.124 | 0.137 |
| Trans05 | -0.329 | -1.077 |
| macrophage_unactivated | -0.625 | -2.642 |
| IL1 | 0.16 | 1.189 |
| Rapamycin | 0.546 | 0.555 |
| Tcell | -0.336 | -1.372 |
| GMCSF | -1.217 | -4.341 |
| IFNab | -0.738 | -1.856 |
| IFNg | -0.275 | -2.237 |
| IFNg_GMCSF1 | 0.094 | -1.405 |
| Rv1432_day32 | -2.468 | 0.0 |
| Rv1565c_day32 | -1.638 | -1.848 |
| secA2_input | -1.628 | 0.044 |
| delta_Rv3594 | -1.121 | -1.182 |
| delta_Rv3717 | -0.905 | -1.349 |
| delta_Rv3811 | -0.48 | -0.818 |
| delta_Rv0954 | -0.404 | 0.173 |
| PonA1 | -0.526 | -0.521 |
| EccD1_KO | -0.885 | -0.717 |
| EspI_KO | 0.094 | -0.707 |
| PE35_KO | -1.138 | -0.636 |
| PPE68_KO | -1.558 | -1.091 |
| glycerol2 | 0.415 | -0.31 |
| lignocerate | 0.368 | -0.571 |
| oleate | -3.413 | -2.156 |
| phosphatidylcholine | 0.819 | 0.973 |
| acetate | -0.175 | -0.515 |
| glucAc | -0.624 | -0.931 |
| Rv0950ko | -0.214 | -0.38 |
| Rv1096ko | -1.704 | -0.302 |
| Rv3684ko | -1.998 | -1.055 |
| delta_otsA_trehalose | 0.264 | -0.214 |