Top 10 genes with highest correlation to Rv1906c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0499/- | (cc=0.4999) | info on Rv0499/- |
| Rv0450c/mmpL4 | (cc=0.4369) | info on Rv0450c/mmpL4 |
| Rv3650/PE33 | (cc=0.418) | info on Rv3650/PE33 |
| Rv2067c/- | (cc=0.4039) | info on Rv2067c/- |
| Rv2851c/- | (cc=0.3911) | info on Rv2851c/- |
| Rv0451c/mmpS4 | (cc=0.3736) | info on Rv0451c/mmpS4 |
| Rv3501c/yrbE4A | (cc=0.3712) | info on Rv3501c/yrbE4A |
| Rv2836c/dinF | (cc=0.3626) | info on Rv2836c/dinF |
| Rv2686c/- | (cc=0.3542) | info on Rv2686c/- |
| Rv3526/kshA | (cc=0.3518) | info on Rv3526/kshA |
Correlation of Rv1906c/- with Rv2067c/-
Normalized LFCs for Rv1906c/-:
(description and provenance of datasets)
| Rv1906c/- | Rv2067c/- | |
| Fe_supp_jason_reseq | -0.466 | 0.284 |
| low_pH_jason_reseq | -0.734 | -0.075 |
| NO_jason_reseq | -0.499 | 0.572 |
| B6_jason_reseq | -1.742 | 0.049 |
| MHCII_jason_reseq | -0.967 | 0.0 |
| Isoniazid02 | 0.004 | 0.0 |
| Rifampicin4 | 0.444 | 0.393 |
| Ethambutol3 | -1.502 | 0.084 |
| Meropenem3 | 0.329 | 0.818 |
| Vancomycin16 | -1.0 | 0.159 |
| Rv2680_day32 | -1.235 | 0.383 |
| H37Rv_KO_MarP | -0.713 | -0.138 |
| hypoxia_3wks | -0.754 | -0.327 |
| hypoxia_6wks | -0.491 | 0.033 |
| glycerol | -0.222 | 0.05 |
| cholesterol | -2.549 | -0.112 |
| AJ | -1.277 | 0.61 |
| Bibs02 | 0.57 | 0.713 |
| Bibs02c | -0.265 | 0.403 |
| BL6 | -1.167 | 0.843 |
| BL6a | -0.263 | 0.936 |
| BXD01 | -1.348 | 0.153 |
| BXD010 | -0.514 | 0.919 |
| BXD011 | -0.649 | 0.54 |
| BXD03 | -0.485 | 0.66 |
| BXD04 | -0.044 | 0.66 |
| BXD05 | 0.354 | 0.646 |
| BXD06 | -0.379 | 0.703 |
| BXD07 | -1.195 | 0.337 |
| BXD08 | -0.837 | 0.324 |
| BXD09 | -1.032 | 0.572 |
| CAST | -0.843 | 0.444 |
| CCcont | 0.909 | 0.67 |
| DS01 | -0.797 | 0.142 |
| DS02 | -0.618 | 0.35 |
| DS04 | -1.504 | -0.024 |
| DS0c | -0.547 | 0.303 |
| GP01 | 0.103 | 0.426 |
| GP02 | -0.766 | 1.662 |
| GP0c | 0.559 | 0.078 |
| NOD | -0.885 | 0.633 |
| NZO | -1.049 | 0.12 |
| PWK | -0.205 | -0.099 |
| H37Rv_KO_CtpC | -0.39 | 0.06 |
| H37Rv_KO_CtpD | -2.039 | -0.132 |
| H37Rv_KO_Rv1272 | -0.338 | 1.155 |
| H37Rv_KO_SugABC | -1.445 | 0.241 |
| H37Rv_KO_MbtN | 1.124 | 1.744 |
| Trans05 | -0.329 | 0.995 |
| macrophage_unactivated | -0.625 | 0.941 |
| IL1 | 0.16 | 0.483 |
| Rapamycin | 0.546 | 0.534 |
| Tcell | -0.336 | 0.453 |
| GMCSF | -1.217 | 0.552 |
| IFNab | -0.738 | 0.345 |
| IFNg | -0.275 | 0.465 |
| IFNg_GMCSF1 | 0.094 | 0.584 |
| Rv1432_day32 | -2.468 | 0.43 |
| Rv1565c_day32 | -1.638 | 0.415 |
| secA2_input | -1.628 | -0.538 |
| delta_Rv3594 | -1.121 | 0.017 |
| delta_Rv3717 | -0.905 | -0.176 |
| delta_Rv3811 | -0.48 | 0.033 |
| delta_Rv0954 | -0.404 | -0.295 |
| PonA1 | -0.526 | -0.278 |
| EccD1_KO | -0.885 | -0.536 |
| EspI_KO | 0.094 | -0.103 |
| PE35_KO | -1.138 | 0.458 |
| PPE68_KO | -1.558 | 0.074 |
| glycerol2 | 0.415 | 0.333 |
| lignocerate | 0.368 | 0.666 |
| oleate | -3.413 | 0.247 |
| phosphatidylcholine | 0.819 | 0.887 |
| acetate | -0.175 | 0.667 |
| glucAc | -0.624 | 0.246 |
| Rv0950ko | -0.214 | -0.154 |
| Rv1096ko | -1.704 | -0.941 |
| Rv3684ko | -1.998 | -0.236 |
| delta_otsA_trehalose | 0.264 | 0.61 |