Top 10 genes with highest correlation to Rv1906c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0499/- | (cc=0.4999) | info on Rv0499/- |
| Rv0450c/mmpL4 | (cc=0.4369) | info on Rv0450c/mmpL4 |
| Rv3650/PE33 | (cc=0.418) | info on Rv3650/PE33 |
| Rv2067c/- | (cc=0.4039) | info on Rv2067c/- |
| Rv2851c/- | (cc=0.3911) | info on Rv2851c/- |
| Rv0451c/mmpS4 | (cc=0.3736) | info on Rv0451c/mmpS4 |
| Rv3501c/yrbE4A | (cc=0.3712) | info on Rv3501c/yrbE4A |
| Rv2836c/dinF | (cc=0.3626) | info on Rv2836c/dinF |
| Rv2686c/- | (cc=0.3542) | info on Rv2686c/- |
| Rv3526/kshA | (cc=0.3518) | info on Rv3526/kshA |
Correlation of Rv1906c/- with Rv0450c/mmpL4
Normalized LFCs for Rv1906c/-:
(description and provenance of datasets)
| Rv1906c/- | Rv0450c/mmpL4 | |
| Fe_supp_jason_reseq | -0.466 | 1.669 |
| low_pH_jason_reseq | -0.734 | 0.328 |
| NO_jason_reseq | -0.499 | -3.148 |
| B6_jason_reseq | -1.742 | -0.701 |
| MHCII_jason_reseq | -0.967 | -0.549 |
| Isoniazid02 | 0.004 | -0.178 |
| Rifampicin4 | 0.444 | -0.273 |
| Ethambutol3 | -1.502 | -0.834 |
| Meropenem3 | 0.329 | 1.15 |
| Vancomycin16 | -1.0 | -0.554 |
| Rv2680_day32 | -1.235 | -1.774 |
| H37Rv_KO_MarP | -0.713 | -0.495 |
| hypoxia_3wks | -0.754 | -1.416 |
| hypoxia_6wks | -0.491 | -1.361 |
| glycerol | -0.222 | -0.876 |
| cholesterol | -2.549 | -2.524 |
| AJ | -1.277 | -3.061 |
| Bibs02 | 0.57 | -0.514 |
| Bibs02c | -0.265 | -0.938 |
| BL6 | -1.167 | -0.982 |
| BL6a | -0.263 | -1.774 |
| BXD01 | -1.348 | -2.856 |
| BXD010 | -0.514 | -2.232 |
| BXD011 | -0.649 | -2.22 |
| BXD03 | -0.485 | -2.222 |
| BXD04 | -0.044 | -2.093 |
| BXD05 | 0.354 | -2.574 |
| BXD06 | -0.379 | -1.808 |
| BXD07 | -1.195 | -2.83 |
| BXD08 | -0.837 | -2.718 |
| BXD09 | -1.032 | -2.688 |
| CAST | -0.843 | -2.599 |
| CCcont | 0.909 | -0.439 |
| DS01 | -0.797 | -2.666 |
| DS02 | -0.618 | -2.455 |
| DS04 | -1.504 | -2.773 |
| DS0c | -0.547 | -0.877 |
| GP01 | 0.103 | -0.265 |
| GP02 | -0.766 | -1.591 |
| GP0c | 0.559 | -1.43 |
| NOD | -0.885 | -2.408 |
| NZO | -1.049 | -2.497 |
| PWK | -0.205 | -1.756 |
| H37Rv_KO_CtpC | -0.39 | -1.532 |
| H37Rv_KO_CtpD | -2.039 | -0.475 |
| H37Rv_KO_Rv1272 | -0.338 | -0.676 |
| H37Rv_KO_SugABC | -1.445 | -0.737 |
| H37Rv_KO_MbtN | 1.124 | 0.835 |
| Trans05 | -0.329 | -1.77 |
| macrophage_unactivated | -0.625 | -1.761 |
| IL1 | 0.16 | 1.189 |
| Rapamycin | 0.546 | 0.97 |
| Tcell | -0.336 | -1.818 |
| GMCSF | -1.217 | -3.712 |
| IFNab | -0.738 | -0.523 |
| IFNg | -0.275 | -1.384 |
| IFNg_GMCSF1 | 0.094 | -2.011 |
| Rv1432_day32 | -2.468 | -3.149 |
| Rv1565c_day32 | -1.638 | -2.282 |
| secA2_input | -1.628 | -0.297 |
| delta_Rv3594 | -1.121 | -0.283 |
| delta_Rv3717 | -0.905 | -0.792 |
| delta_Rv3811 | -0.48 | -0.132 |
| delta_Rv0954 | -0.404 | -1.224 |
| PonA1 | -0.526 | -0.669 |
| EccD1_KO | -0.885 | -0.592 |
| EspI_KO | 0.094 | -1.098 |
| PE35_KO | -1.138 | -0.744 |
| PPE68_KO | -1.558 | -1.232 |
| glycerol2 | 0.415 | 0.126 |
| lignocerate | 0.368 | 0.328 |
| oleate | -3.413 | -2.247 |
| phosphatidylcholine | 0.819 | 1.239 |
| acetate | -0.175 | 0.447 |
| glucAc | -0.624 | 0.485 |
| Rv0950ko | -0.214 | -0.63 |
| Rv1096ko | -1.704 | -0.464 |
| Rv3684ko | -1.998 | -1.068 |
| delta_otsA_trehalose | 0.264 | 0.685 |