Top 10 genes with highest correlation to Rv1906c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv0499/- | (cc=0.4999) | info on Rv0499/- |
| Rv0450c/mmpL4 | (cc=0.4369) | info on Rv0450c/mmpL4 |
| Rv3650/PE33 | (cc=0.418) | info on Rv3650/PE33 |
| Rv2067c/- | (cc=0.4039) | info on Rv2067c/- |
| Rv2851c/- | (cc=0.3911) | info on Rv2851c/- |
| Rv0451c/mmpS4 | (cc=0.3736) | info on Rv0451c/mmpS4 |
| Rv3501c/yrbE4A | (cc=0.3712) | info on Rv3501c/yrbE4A |
| Rv2836c/dinF | (cc=0.3626) | info on Rv2836c/dinF |
| Rv2686c/- | (cc=0.3542) | info on Rv2686c/- |
| Rv3526/kshA | (cc=0.3518) | info on Rv3526/kshA |
Correlation of Rv1906c/- with Rv2686c/-
Normalized LFCs for Rv1906c/-:
(description and provenance of datasets)
| Rv1906c/- | Rv2686c/- | |
| Fe_supp_jason_reseq | -0.466 | 0.272 |
| low_pH_jason_reseq | -0.734 | 0.636 |
| NO_jason_reseq | -0.499 | 0.234 |
| B6_jason_reseq | -1.742 | 0.553 |
| MHCII_jason_reseq | -0.967 | 0.534 |
| Isoniazid02 | 0.004 | -0.247 |
| Rifampicin4 | 0.444 | 0.471 |
| Ethambutol3 | -1.502 | -0.207 |
| Meropenem3 | 0.329 | 0.322 |
| Vancomycin16 | -1.0 | 0.74 |
| Rv2680_day32 | -1.235 | -0.573 |
| H37Rv_KO_MarP | -0.713 | -0.409 |
| hypoxia_3wks | -0.754 | 0.068 |
| hypoxia_6wks | -0.491 | 0.332 |
| glycerol | -0.222 | -0.252 |
| cholesterol | -2.549 | -0.664 |
| AJ | -1.277 | 0.509 |
| Bibs02 | 0.57 | -0.073 |
| Bibs02c | -0.265 | 0.541 |
| BL6 | -1.167 | 0.15 |
| BL6a | -0.263 | 0.202 |
| BXD01 | -1.348 | -0.297 |
| BXD010 | -0.514 | 0.153 |
| BXD011 | -0.649 | 0.228 |
| BXD03 | -0.485 | -0.183 |
| BXD04 | -0.044 | -0.392 |
| BXD05 | 0.354 | 0.23 |
| BXD06 | -0.379 | 0.013 |
| BXD07 | -1.195 | 0.378 |
| BXD08 | -0.837 | 0.524 |
| BXD09 | -1.032 | 0.156 |
| CAST | -0.843 | -0.115 |
| CCcont | 0.909 | 0.153 |
| DS01 | -0.797 | -0.32 |
| DS02 | -0.618 | -0.523 |
| DS04 | -1.504 | -0.721 |
| DS0c | -0.547 | -0.317 |
| GP01 | 0.103 | -0.202 |
| GP02 | -0.766 | -0.321 |
| GP0c | 0.559 | 0.563 |
| NOD | -0.885 | -0.568 |
| NZO | -1.049 | -0.581 |
| PWK | -0.205 | 0.462 |
| H37Rv_KO_CtpC | -0.39 | -0.22 |
| H37Rv_KO_CtpD | -2.039 | 0.072 |
| H37Rv_KO_Rv1272 | -0.338 | -0.272 |
| H37Rv_KO_SugABC | -1.445 | 0.765 |
| H37Rv_KO_MbtN | 1.124 | 0.721 |
| Trans05 | -0.329 | -0.836 |
| macrophage_unactivated | -0.625 | -0.593 |
| IL1 | 0.16 | -0.377 |
| Rapamycin | 0.546 | 0.856 |
| Tcell | -0.336 | -0.613 |
| GMCSF | -1.217 | 0.515 |
| IFNab | -0.738 | -0.384 |
| IFNg | -0.275 | 0.722 |
| IFNg_GMCSF1 | 0.094 | 0.0 |
| Rv1432_day32 | -2.468 | -1.635 |
| Rv1565c_day32 | -1.638 | -0.069 |
| secA2_input | -1.628 | -1.212 |
| delta_Rv3594 | -1.121 | 0.385 |
| delta_Rv3717 | -0.905 | 0.627 |
| delta_Rv3811 | -0.48 | 0.0 |
| delta_Rv0954 | -0.404 | 0.536 |
| PonA1 | -0.526 | -0.196 |
| EccD1_KO | -0.885 | -0.053 |
| EspI_KO | 0.094 | -1.001 |
| PE35_KO | -1.138 | -0.563 |
| PPE68_KO | -1.558 | -1.123 |
| glycerol2 | 0.415 | 0.28 |
| lignocerate | 0.368 | 0.805 |
| oleate | -3.413 | -0.265 |
| phosphatidylcholine | 0.819 | 0.567 |
| acetate | -0.175 | 0.549 |
| glucAc | -0.624 | 0.733 |
| Rv0950ko | -0.214 | 0.0 |
| Rv1096ko | -1.704 | -0.06 |
| Rv3684ko | -1.998 | -0.065 |
| delta_otsA_trehalose | 0.264 | 0.44 |