Top 10 genes with highest correlation to Rv1885c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1548c/PPE21 | (cc=0.5453) | info on Rv1548c/PPE21 |
| Rv2038c/- | (cc=0.4839) | info on Rv2038c/- |
| Rv3125c/PPE49 | (cc=0.4827) | info on Rv3125c/PPE49 |
| Rv2957/- | (cc=0.4605) | info on Rv2957/- |
| Rv1503c/- | (cc=0.4584) | info on Rv1503c/- |
| Rv1387/PPE20 | (cc=0.4569) | info on Rv1387/PPE20 |
| Rv1917c/PPE34 | (cc=0.4569) | info on Rv1917c/PPE34 |
| Rv2809/- | (cc=0.4557) | info on Rv2809/- |
| Rv1831/- | (cc=0.4544) | info on Rv1831/- |
| Rv0844c/narL | (cc=0.453) | info on Rv0844c/narL |
Correlation of Rv1885c/- with Rv2038c/-
Normalized LFCs for Rv1885c/-:
(description and provenance of datasets)
| Rv1885c/- | Rv2038c/- | |
| Fe_supp_jason_reseq | -0.204 | -1.699 |
| low_pH_jason_reseq | -0.37 | -0.127 |
| NO_jason_reseq | -0.221 | -0.465 |
| B6_jason_reseq | -0.127 | -2.64 |
| MHCII_jason_reseq | 0.283 | -0.977 |
| Isoniazid02 | -0.115 | 0.115 |
| Rifampicin4 | -0.574 | -0.149 |
| Ethambutol3 | 0.129 | -0.067 |
| Meropenem3 | 0.028 | -0.321 |
| Vancomycin16 | -0.732 | 0.21 |
| Rv2680_day32 | -0.112 | -1.358 |
| H37Rv_KO_MarP | 0.109 | 0.207 |
| hypoxia_3wks | 0.08 | -0.183 |
| hypoxia_6wks | -0.263 | 1.462 |
| glycerol | -0.252 | -1.252 |
| cholesterol | -0.495 | -1.217 |
| AJ | 0.148 | -0.494 |
| Bibs02 | -0.044 | -1.537 |
| Bibs02c | -0.341 | -0.591 |
| BL6 | 0.592 | 1.212 |
| BL6a | -0.125 | 0.106 |
| BXD01 | -0.012 | -0.074 |
| BXD010 | -0.281 | 0.34 |
| BXD011 | 0.275 | 0.888 |
| BXD03 | 0.223 | 0.622 |
| BXD04 | 0.864 | 0.612 |
| BXD05 | 0.115 | 1.52 |
| BXD06 | 0.0 | 0.438 |
| BXD07 | 0.346 | 0.731 |
| BXD08 | 0.079 | 0.849 |
| BXD09 | 0.09 | 0.979 |
| CAST | 0.01 | 0.184 |
| CCcont | 0.3 | 0.764 |
| DS01 | -0.546 | -0.936 |
| DS02 | -0.503 | -1.575 |
| DS04 | -0.994 | -0.225 |
| DS0c | -0.104 | -0.251 |
| GP01 | -0.087 | 1.204 |
| GP02 | 0.512 | 0.544 |
| GP0c | 0.172 | 0.598 |
| NOD | 0.308 | -0.404 |
| NZO | 0.24 | 0.306 |
| PWK | 0.054 | -0.627 |
| H37Rv_KO_CtpC | 0.418 | 0.087 |
| H37Rv_KO_CtpD | 0.298 | 1.034 |
| H37Rv_KO_Rv1272 | 0.94 | 1.002 |
| H37Rv_KO_SugABC | 0.908 | 0.784 |
| H37Rv_KO_MbtN | 0.927 | 1.145 |
| Trans05 | 1.173 | 2.398 |
| macrophage_unactivated | -0.019 | -0.246 |
| IL1 | -0.839 | 1.397 |
| Rapamycin | -0.298 | -0.239 |
| Tcell | -0.098 | 0.544 |
| GMCSF | 0.121 | 0.38 |
| IFNab | 0.157 | 0.834 |
| IFNg | -0.08 | 0.738 |
| IFNg_GMCSF1 | 0.317 | 0.93 |
| Rv1432_day32 | 0.297 | -0.614 |
| Rv1565c_day32 | -0.608 | 0.096 |
| secA2_input | -0.282 | -0.504 |
| delta_Rv3594 | 0.219 | 0.035 |
| delta_Rv3717 | -0.128 | -0.218 |
| delta_Rv3811 | 0.355 | 0.034 |
| delta_Rv0954 | -0.083 | -0.864 |
| PonA1 | -0.751 | -2.363 |
| EccD1_KO | 0.474 | 0.914 |
| EspI_KO | -0.622 | -0.257 |
| PE35_KO | 0.175 | 0.187 |
| PPE68_KO | -0.09 | -0.678 |
| glycerol2 | 0.233 | 0.607 |
| lignocerate | 0.304 | 1.538 |
| oleate | -0.238 | -1.418 |
| phosphatidylcholine | -0.05 | 0.531 |
| acetate | 0.141 | 1.998 |
| glucAc | 0.311 | 1.735 |
| Rv0950ko | 0.19 | -1.049 |
| Rv1096ko | -0.033 | 0.0 |
| Rv3684ko | -0.684 | -0.727 |
| delta_otsA_trehalose | -0.217 | 0.087 |