Top 10 genes with highest correlation to Rv1885c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1548c/PPE21 | (cc=0.5453) | info on Rv1548c/PPE21 |
| Rv2038c/- | (cc=0.4839) | info on Rv2038c/- |
| Rv3125c/PPE49 | (cc=0.4827) | info on Rv3125c/PPE49 |
| Rv2957/- | (cc=0.4605) | info on Rv2957/- |
| Rv1503c/- | (cc=0.4584) | info on Rv1503c/- |
| Rv1387/PPE20 | (cc=0.4569) | info on Rv1387/PPE20 |
| Rv1917c/PPE34 | (cc=0.4569) | info on Rv1917c/PPE34 |
| Rv2809/- | (cc=0.4557) | info on Rv2809/- |
| Rv1831/- | (cc=0.4544) | info on Rv1831/- |
| Rv0844c/narL | (cc=0.453) | info on Rv0844c/narL |
Correlation of Rv1885c/- with Rv1831/-
Normalized LFCs for Rv1885c/-:
(description and provenance of datasets)
| Rv1885c/- | Rv1831/- | |
| Fe_supp_jason_reseq | -0.204 | -0.275 |
| low_pH_jason_reseq | -0.37 | -0.952 |
| NO_jason_reseq | -0.221 | -0.68 |
| B6_jason_reseq | -0.127 | -1.36 |
| MHCII_jason_reseq | 0.283 | -0.162 |
| Isoniazid02 | -0.115 | 0.665 |
| Rifampicin4 | -0.574 | -0.531 |
| Ethambutol3 | 0.129 | 1.136 |
| Meropenem3 | 0.028 | 0.271 |
| Vancomycin16 | -0.732 | -0.355 |
| Rv2680_day32 | -0.112 | 0.69 |
| H37Rv_KO_MarP | 0.109 | -0.512 |
| hypoxia_3wks | 0.08 | 0.124 |
| hypoxia_6wks | -0.263 | 1.021 |
| glycerol | -0.252 | -0.11 |
| cholesterol | -0.495 | 0.052 |
| AJ | 0.148 | -0.613 |
| Bibs02 | -0.044 | -1.674 |
| Bibs02c | -0.341 | 0.349 |
| BL6 | 0.592 | 0.796 |
| BL6a | -0.125 | 1.37 |
| BXD01 | -0.012 | 2.036 |
| BXD010 | -0.281 | 0.407 |
| BXD011 | 0.275 | 1.379 |
| BXD03 | 0.223 | 1.217 |
| BXD04 | 0.864 | 1.986 |
| BXD05 | 0.115 | 1.501 |
| BXD06 | 0.0 | 1.635 |
| BXD07 | 0.346 | 1.565 |
| BXD08 | 0.079 | 2.417 |
| BXD09 | 0.09 | 1.261 |
| CAST | 0.01 | -0.087 |
| CCcont | 0.3 | 1.331 |
| DS01 | -0.546 | -0.349 |
| DS02 | -0.503 | -0.487 |
| DS04 | -0.994 | 1.148 |
| DS0c | -0.104 | 0.476 |
| GP01 | -0.087 | -0.413 |
| GP02 | 0.512 | 1.186 |
| GP0c | 0.172 | -0.086 |
| NOD | 0.308 | 1.302 |
| NZO | 0.24 | -1.05 |
| PWK | 0.054 | 0.198 |
| H37Rv_KO_CtpC | 0.418 | 0.72 |
| H37Rv_KO_CtpD | 0.298 | -0.09 |
| H37Rv_KO_Rv1272 | 0.94 | 1.759 |
| H37Rv_KO_SugABC | 0.908 | 1.836 |
| H37Rv_KO_MbtN | 0.927 | 1.611 |
| Trans05 | 1.173 | 1.252 |
| macrophage_unactivated | -0.019 | 0.568 |
| IL1 | -0.839 | -0.083 |
| Rapamycin | -0.298 | -0.439 |
| Tcell | -0.098 | 0.091 |
| GMCSF | 0.121 | 0.314 |
| IFNab | 0.157 | 0.689 |
| IFNg | -0.08 | 0.265 |
| IFNg_GMCSF1 | 0.317 | 0.547 |
| Rv1432_day32 | 0.297 | 1.313 |
| Rv1565c_day32 | -0.608 | -0.471 |
| secA2_input | -0.282 | -0.25 |
| delta_Rv3594 | 0.219 | -0.494 |
| delta_Rv3717 | -0.128 | 0.323 |
| delta_Rv3811 | 0.355 | -0.004 |
| delta_Rv0954 | -0.083 | -0.375 |
| PonA1 | -0.751 | -1.199 |
| EccD1_KO | 0.474 | 0.96 |
| EspI_KO | -0.622 | 0.414 |
| PE35_KO | 0.175 | -0.029 |
| PPE68_KO | -0.09 | 0.106 |
| glycerol2 | 0.233 | -0.263 |
| lignocerate | 0.304 | 0.145 |
| oleate | -0.238 | 0.424 |
| phosphatidylcholine | -0.05 | 0.326 |
| acetate | 0.141 | -0.8 |
| glucAc | 0.311 | -0.318 |
| Rv0950ko | 0.19 | -0.012 |
| Rv1096ko | -0.033 | -0.546 |
| Rv3684ko | -0.684 | -0.193 |
| delta_otsA_trehalose | -0.217 | -2.555 |