Top 10 genes with highest correlation to Rv1749c/-:
| update plot | correlation | link to info on gene |
|---|---|---|
| Rv1526c/- | (cc=0.5462) | info on Rv1526c/- |
| Rv3213c/- | (cc=0.5165) | info on Rv3213c/- |
| Rv3429/PPE59 | (cc=0.5102) | info on Rv3429/PPE59 |
| Rv1583c/- | (cc=0.5057) | info on Rv1583c/- |
| Rv0028/- | (cc=0.5054) | info on Rv0028/- |
| Rv0042c/- | (cc=0.4944) | info on Rv0042c/- |
| Rv3217c/- | (cc=0.4881) | info on Rv3217c/- |
| Rv2237/- | (cc=0.4811) | info on Rv2237/- |
| Rv1981c/nrdF1 | (cc=0.4701) | info on Rv1981c/nrdF1 |
| Rv0432/sodC | (cc=0.47) | info on Rv0432/sodC |
Correlation of Rv1749c/- with Rv3429/PPE59
Normalized LFCs for Rv1749c/-:
(description and provenance of datasets)
| Rv1749c/- | Rv3429/PPE59 | |
| Fe_supp_jason_reseq | 0.218 | 0.628 |
| low_pH_jason_reseq | 0.11 | 0.202 |
| NO_jason_reseq | 0.278 | -0.029 |
| B6_jason_reseq | -0.818 | -1.06 |
| MHCII_jason_reseq | -0.357 | 0.265 |
| Isoniazid02 | -0.445 | -0.125 |
| Rifampicin4 | -0.542 | -0.566 |
| Ethambutol3 | -0.158 | 1.225 |
| Meropenem3 | 0.097 | 1.438 |
| Vancomycin16 | -0.366 | 0.215 |
| Rv2680_day32 | -1.062 | -0.23 |
| H37Rv_KO_MarP | -0.278 | 0.346 |
| hypoxia_3wks | -0.666 | 0.0 |
| hypoxia_6wks | -0.714 | 0.069 |
| glycerol | -1.006 | -1.568 |
| cholesterol | -0.46 | -0.909 |
| AJ | -0.05 | 0.382 |
| Bibs02 | -0.378 | -0.276 |
| Bibs02c | -0.139 | 0.412 |
| BL6 | 1.067 | 1.223 |
| BL6a | 0.242 | 1.017 |
| BXD01 | 0.192 | 1.398 |
| BXD010 | 0.787 | 1.497 |
| BXD011 | 0.486 | 1.714 |
| BXD03 | -0.291 | 0.988 |
| BXD04 | -0.064 | 0.307 |
| BXD05 | 0.642 | 1.232 |
| BXD06 | 0.111 | 1.426 |
| BXD07 | 0.57 | 1.178 |
| BXD08 | 0.547 | 1.307 |
| BXD09 | 0.268 | 1.463 |
| CAST | -0.118 | 0.379 |
| CCcont | 0.844 | 0.942 |
| DS01 | 0.149 | 0.77 |
| DS02 | 0.334 | 0.668 |
| DS04 | 0.537 | 1.026 |
| DS0c | 0.223 | 0.728 |
| GP01 | 1.649 | 1.468 |
| GP02 | 0.6 | 0.874 |
| GP0c | 1.255 | 1.149 |
| NOD | 0.094 | 0.443 |
| NZO | -0.276 | 0.516 |
| PWK | -0.207 | 0.602 |
| H37Rv_KO_CtpC | -0.791 | 1.547 |
| H37Rv_KO_CtpD | 0.967 | 1.898 |
| H37Rv_KO_Rv1272 | -0.149 | 0.86 |
| H37Rv_KO_SugABC | 1.05 | 1.451 |
| H37Rv_KO_MbtN | -0.061 | 0.74 |
| Trans05 | 0.913 | 1.42 |
| macrophage_unactivated | -0.196 | 0.417 |
| IL1 | -0.43 | 0.658 |
| Rapamycin | -0.301 | -0.203 |
| Tcell | -0.029 | 1.121 |
| GMCSF | 0.327 | -0.412 |
| IFNab | 0.178 | -0.411 |
| IFNg | 0.024 | 0.216 |
| IFNg_GMCSF1 | 0.795 | -0.459 |
| Rv1432_day32 | 0.314 | 0.09 |
| Rv1565c_day32 | -2.443 | -1.088 |
| secA2_input | 0.36 | -0.399 |
| delta_Rv3594 | 0.45 | -0.722 |
| delta_Rv3717 | -0.011 | -0.812 |
| delta_Rv3811 | 0.109 | -0.366 |
| delta_Rv0954 | 0.205 | -0.397 |
| PonA1 | 0.749 | -0.518 |
| EccD1_KO | -0.118 | 0.224 |
| EspI_KO | -0.06 | 0.408 |
| PE35_KO | -0.528 | 0.548 |
| PPE68_KO | -0.378 | 0.189 |
| glycerol2 | 0.668 | 0.426 |
| lignocerate | 1.269 | 0.591 |
| oleate | -0.123 | 0.417 |
| phosphatidylcholine | 0.859 | 0.916 |
| acetate | 1.322 | 0.472 |
| glucAc | 1.325 | 0.483 |
| Rv0950ko | 0.289 | 0.422 |
| Rv1096ko | -0.642 | -0.582 |
| Rv3684ko | -1.002 | -0.54 |
| delta_otsA_trehalose | 0.706 | 0.083 |